Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

HIST1H2AH; HIST1H2AJ; HIST1H2AM

Species

C.savignyi

Unique Gene ID

Cisavi.g00002839

Gene Model ID

Cisavi.CG.ENS81.R16.1821000-1822269

Location

R16:1820999..1822269

Transcript Models and Sequences

  Cisavi.CG.ENS81.R16.1821000-1822269.14649.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

8 results

IPR Term Analysis Definition
Histone_H2A CDD Histone H2A
Histone_H2A_C Pfam Histone H2A, C-terminal domain
Histone_H2A SMART Histone H2A
Histone-fold SUPERFAMILY Histone-fold
Histone_H2A_CS ProSitePatterns Histone H2A conserved site
Histone_H2A PRINTS Histone H2A
Histone_H2A/H2B/H3 Pfam Histone H2A/H2B/H3
Histone-fold Gene3D Histone-fold

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

45 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
nucleosome Hs cellular component
nuclear chromatin Hs cellular component
DNA binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
chromosome Hs cellular component
chromatin silencing Hs biological process
enzyme binding Hs molecular function
protein heterodimerization activity Hs molecular function
extracellular exosome Hs cellular component
DNA damage checkpoint Hs biological process
double-strand break repair via homologous recombination Hs biological process
chromosome, telomeric region Hs cellular component
nuclear chromosome, telomeric region Hs cellular component
chromatin Hs cellular component
nuclear nucleosome Hs cellular component
condensed nuclear chromosome Hs cellular component
male germ cell nucleus Hs cellular component
XY body Hs cellular component
damaged DNA binding Hs molecular function
nucleoplasm Hs cellular component
replication fork Hs cellular component
centrosome Hs cellular component
DNA repair Hs biological process
double-strand break repair Hs biological process
double-strand break repair via nonhomologous end joining Hs biological process
DNA recombination Hs biological process
chromatin organization Hs biological process
nucleosome assembly Hs biological process
nucleosome disassembly Hs biological process
cellular response to DNA damage stimulus Hs biological process
cell cycle Hs biological process
spermatogenesis Hs biological process
negative regulation of cell proliferation Hs biological process
response to ionizing radiation Hs biological process
viral process Hs biological process
nuclear speck Hs cellular component
cerebral cortex development Hs biological process
site of double-strand break Hs cellular component
histone binding Hs molecular function
positive regulation of DNA repair Hs biological process
meiotic cell cycle Hs biological process
UV-damage excision repair Hs biological process
cellular response to gamma radiation Hs biological process
cellular senescence Hs biological process

GO (Blast)

9 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleosome Hs cellular component 211 5.28e-72
nuclear chromatin Hs cellular component 211 5.28e-72
DNA binding Hs molecular function 211 5.28e-72
protein binding Hs molecular function 211 6.94e-72
nucleus Hs cellular component 211 5.28e-72
chromosome Hs cellular component 211 5.28e-72
enzyme binding Hs molecular function 211 6.94e-72
protein heterodimerization activity Hs molecular function 211 5.28e-72
extracellular exosome Hs cellular component 211 5.28e-72

GO (InterProScan)

4 results

GO Term Analysis Type e-value
nucleosome SMART cellular component 1.8E-78
DNA binding SMART molecular function 1.8E-78
nucleus SMART cellular component 1.8E-78
protein heterodimerization activity Gene3D molecular function 6.1E-64