Aniseed - Gene card

Gene Card

Best human hits

STRN; STRN3; STRN4

Species

C.savignyi

Unique Gene ID

Cisavi.g00002866

Gene Model ID

Cisavi.CG.ENS81.R16.2085720-2098955

Location

R16:2085719..2098955

Transcript Models and Sequences

Cisavi.CG.ENS81.R16.2085720-2098955.15884.t
Cisavi.CG.ENS81.R16.2085720-2098955.15885.t
Cisavi.CG.ENS81.R16.2085720-2098955.15886.t
Cisavi.CG.ENS81.R16.2085720-2098955.15887.t
Cisavi.CG.ENS81.R16.2085720-2098955.15888.t
Cisavi.CG.ENS81.R16.2085720-2098955.15889.t
Cisavi.CG.ENS81.R16.2085720-2098955.15890.t
Cisavi.CG.ENS81.R16.2085720-2098955.15891.t
Cisavi.CG.ENS81.R16.2085720-2098955.15892.t
Cisavi.CG.ENS81.R16.2085720-2098955.15893.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

9 results

IPR Term	Analysis	Definition
WD40_repeat	SMART	WD40 repeat
WD40/YVTN_repeat-like_dom_sf	Gene3D	WD40/YVTN repeat-like-containing domain superfamily
WD40_repeat_CS	ProSitePatterns	WD40 repeat, conserved site
G-protein_beta_WD-40_rep	PRINTS	G-protein beta WD-40 repeat
Striatin_N	Pfam	Striatin, N-terminal
WD40_repeat_dom_sf	SUPERFAMILY	WD40-repeat-containing domain superfamily
WD40_repeat	ProSiteProfiles	WD40 repeat
WD40_repeat	Pfam	WD40 repeat
WD40_repeat_dom	ProSiteProfiles	WD40-repeat-containing domain

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

30 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
protein phosphatase type 2A complex	Hs	cellular component
protein binding	Hs	molecular function
calmodulin binding	Hs	molecular function
nucleoplasm	Hs	cellular component
cytoplasm	Hs	cellular component
Golgi apparatus	Hs	cellular component
plasma membrane	Hs	cellular component
bicellular tight junction	Hs	cellular component
locomotory behavior	Hs	biological process
negative regulation of cell proliferation	Hs	biological process
postsynaptic density	Hs	cellular component
membrane	Hs	cellular component
Wnt signaling pathway	Hs	biological process
dendrite development	Hs	biological process
Rho GTPase binding	Hs	molecular function
protein domain specific binding	Hs	molecular function
estrogen receptor binding	Hs	molecular function
dendrite	Hs	cellular component
response to estradiol	Hs	biological process
macromolecular complex	Hs	cellular component
negative regulation of intracellular estrogen receptor signaling pathway	Hs	biological process
cell projection	Hs	cellular component
neuronal cell body	Hs	cellular component
dendritic spine	Hs	cellular component
macromolecular complex binding	Hs	molecular function
postsynaptic membrane	Hs	cellular component
negative regulation of transcription, DNA-templated	Hs	biological process
protein phosphatase 2A binding	Hs	molecular function
armadillo repeat domain binding	Hs	molecular function
bicellular tight junction assembly	Hs	biological process

GO (Blast)

22 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
protein phosphatase type 2A complex	Hs	cellular component	720	0.0
protein binding	Hs	molecular function	720	0.0
calmodulin binding	Hs	molecular function	720	0.0
nucleoplasm	Hs	cellular component	720	0.0
cytoplasm	Hs	cellular component	720	0.0
Golgi apparatus	Hs	cellular component	720	0.0
plasma membrane	Hs	cellular component	720	0.0
bicellular tight junction	Hs	cellular component	696	0.0
postsynaptic density	Hs	cellular component	696	0.0
membrane	Hs	cellular component	720	0.0
Rho GTPase binding	Hs	molecular function	720	0.0
protein domain specific binding	Hs	molecular function	404	1.96e-130
estrogen receptor binding	Hs	molecular function	696	0.0
dendrite	Hs	cellular component	720	0.0
macromolecular complex	Hs	cellular component	720	0.0
cell projection	Hs	cellular component	696	0.0
neuronal cell body	Hs	cellular component	720	0.0
dendritic spine	Hs	cellular component	696	0.0
macromolecular complex binding	Hs	molecular function	720	0.0
postsynaptic membrane	Hs	cellular component	696	0.0
protein phosphatase 2A binding	Hs	molecular function	720	0.0
armadillo repeat domain binding	Hs	molecular function	720	0.0

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
protein binding	SUPERFAMILY	molecular function	4.66E-68