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Gene Card

Best human hits

COL14A1; COL6A5; MATN4

Species

C.savignyi

Unique Gene ID

Cisavi.g00003670

Gene Model ID

Cisavi.CG.ENS81.R19.1918328-1922862

Location

R19:1918327..1922862

Transcript Models and Sequences

  Cisavi.CG.ENS81.R19.1918328-1922862.15214.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
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 Click here to see the tree inference method

Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
VWF_A Pfam von Willebrand factor, type A
vWFA_dom_sf SUPERFAMILY von Willebrand factor A-like domain superfamily
VWF_A ProSiteProfiles von Willebrand factor, type A
VWF_A SMART von Willebrand factor, type A
vWFA_dom_sf Gene3D von Willebrand factor A-like domain superfamily

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

14 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA binding Hs molecular function 52.0 1.95e-07
extracellular matrix structural constituent Hs molecular function 52.0 1.95e-07
calcium ion binding Hs molecular function 47.0 7.65e-06
protein binding Hs molecular function 52.0 1.95e-07
collagen binding Hs molecular function 52.0 1.95e-07
extracellular region Hs cellular component 52.0 1.95e-07
proteinaceous extracellular matrix Hs cellular component 52.0 1.95e-07
collagen trimer Hs cellular component 52.0 1.95e-07
collagen type XIV trimer Hs cellular component 52.0 1.95e-07
extracellular space Hs cellular component 52.0 1.95e-07
endoplasmic reticulum lumen Hs cellular component 52.0 1.95e-07
protein binding, bridging Hs molecular function 52.0 1.95e-07
extracellular matrix Hs cellular component 52.0 1.95e-07
extracellular exosome Hs cellular component 52.0 1.95e-07

GO (InterProScan)

No result

GO Term Analysis Type e-value





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