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GENE CARD

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Gene Card

Best human hits

MTF1; ZNF143; ZNF76

Species

C.savignyi

Unique Gene ID

Cisavi.g00006550

Gene Model ID

Cisavi.CG.ENS81.R31.694896-696666

Location

R31:694895..696666

Transcript Models and Sequences

  Cisavi.CG.ENS81.R31.694896-696666.03646.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
Znf_C2H2_type ProSiteProfiles Zinc finger C2H2-type
Znf_C2H2_sf SUPERFAMILY Zinc finger C2H2 superfamily
Znf_C2H2_type ProSitePatterns Zinc finger C2H2-type
Znf_C2H2_type SMART Zinc finger C2H2-type

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

4 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
nucleic acid binding Hs molecular function
transcription factor activity, sequence-specific DNA binding Hs molecular function
regulation of transcription, DNA-templated Hs biological process
intracellular Hs cellular component

GO (Blast)

15 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 288 2.03e-93
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 299 1.83e-98
core promoter binding Hs molecular function 161 4.52e-45
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 288 2.03e-93
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding Hs molecular function 299 1.83e-98
nucleic acid binding Hs molecular function 299 1.83e-98
DNA binding Hs molecular function 299 1.83e-98
transcription factor activity, sequence-specific DNA binding Hs molecular function 161 4.52e-45
transcription coactivator activity Hs molecular function 161 4.52e-45
protein binding Hs molecular function 288 2.03e-93
nucleus Hs cellular component 299 1.83e-98
nucleoplasm Hs cellular component 288 2.03e-93
histone acetyltransferase binding Hs molecular function 161 4.52e-45
sequence-specific DNA binding Hs molecular function 299 1.83e-98
metal ion binding Hs molecular function 299 1.83e-98

GO (InterProScan)

1 result

GO Term Analysis Type e-value
nucleic acid binding SMART molecular function 9.6E-5