Aniseed - Gene card

Gene Card

Best human hits

HDAC4; HDAC7; HDAC9

Species

C.savignyi

Unique Gene ID

Cisavi.g00006974

Gene Model ID

Cisavi.CG.ENS81.R37.2783473-2787738

Location

R37:2783472..2787738

Transcript Models and Sequences

Cisavi.CG.ENS81.R37.2783473-2787738.14010.t
Cisavi.CG.ENS81.R37.2783473-2787738.14011.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term	Analysis	Definition
Ureohydrolase_dom_sf	SUPERFAMILY	Ureohydrolase domain superfamily
His_deacetylse_dom_sf	Gene3D	Histone deacetylase domain superfamily
His_deacetylse	PANTHER	Histone deacetylase superfamily
His_deacetylse_dom	Pfam	Histone deacetylase domain
His_deacetylse	PRINTS	Histone deacetylase superfamily

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

38 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
histone deacetylase complex	Hs	cellular component	341	1.27e-109
core promoter binding	Hs	molecular function	341	1.27e-109
RNA polymerase II transcription factor binding	Hs	molecular function	341	1.27e-109
DNA binding	Hs	molecular function	341	1.27e-109
chromatin binding	Hs	molecular function	341	1.27e-109
transcription corepressor activity	Hs	molecular function	341	1.27e-109
histone deacetylase activity	Hs	molecular function	341	1.27e-109
protein kinase C binding	Hs	molecular function	318	4.20e-101
protein binding	Hs	molecular function	341	1.27e-109
nucleus	Hs	cellular component	341	1.27e-109
nucleoplasm	Hs	cellular component	341	1.27e-109
transcription factor complex	Hs	cellular component	318	4.20e-101
cytoplasm	Hs	cellular component	341	1.27e-109
cytosol	Hs	cellular component	341	1.27e-109
transcription factor binding	Hs	molecular function	341	1.27e-109
zinc ion binding	Hs	molecular function	341	1.27e-109
hydrolase activity	Hs	molecular function	341	1.27e-109
transcriptional repressor complex	Hs	cellular component	341	1.27e-109
SUMO transferase activity	Hs	molecular function	306	5.47e-97
protein kinase binding	Hs	molecular function	341	1.27e-109
sarcomere	Hs	cellular component	341	1.27e-109
Z disc	Hs	cellular component	341	1.27e-109
potassium ion binding	Hs	molecular function	341	1.27e-109
neuromuscular junction	Hs	cellular component	341	1.27e-109
A band	Hs	cellular component	341	1.27e-109
NAD-dependent histone deacetylase activity (H3-K14 specific)	Hs	molecular function	341	1.27e-109
protein deacetylase activity	Hs	molecular function	341	1.27e-109
activating transcription factor binding	Hs	molecular function	341	1.27e-109
histone methyltransferase complex	Hs	cellular component	318	4.20e-101
actomyosin	Hs	cellular component	341	1.27e-109
identical protein binding	Hs	molecular function	341	1.27e-109
histone deacetylase binding	Hs	molecular function	341	1.27e-109
sequence-specific DNA binding	Hs	molecular function	341	1.27e-109
transcription regulatory region DNA binding	Hs	molecular function	341	1.27e-109
metal ion binding	Hs	molecular function	341	1.27e-109
repressing transcription factor binding	Hs	molecular function	341	1.27e-109
14-3-3 protein binding	Hs	molecular function	306	5.47e-97
promoter-specific chromatin binding	Hs	molecular function	341	1.27e-109

GO (InterProScan)

No result

GO Term	Analysis	Type	e-value