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GENE CARD

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Gene Card

Best human hits

DES; GFAP; VIM

Species

C.savignyi

Unique Gene ID

Cisavi.g00009497

Gene Model ID

Cisavi.CG.ENS81.R58.3067831-3077101

Location

R58:3067830..3077101

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
Intermediate_filament_CS ProSitePatterns Intermediate filament protein, conserved site
IF PANTHER Intermediate filament protein
Keratin_I PRINTS Keratin, type I
IF Pfam Intermediate filament protein
IF SMART Intermediate filament protein

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

103 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
double-stranded RNA binding Hs molecular function
integrin binding Hs molecular function
structural molecule activity Hs molecular function
structural constituent of cytoskeleton Hs molecular function
structural constituent of eye lens Hs molecular function
protein binding Hs molecular function
intracellular Hs cellular component
nucleus Hs cellular component
cytoplasm Hs cellular component
lysosome Hs cellular component
peroxisome Hs cellular component
cytosol Hs cellular component
polysome Hs cellular component
cytoskeleton Hs cellular component
intermediate filament Hs cellular component
neurofilament Hs cellular component
plasma membrane Hs cellular component
cell-cell junction Hs cellular component
fascia adherens Hs cellular component
focal adhesion Hs cellular component
muscle contraction Hs biological process
cytoskeleton organization Hs biological process
regulation of heart contraction Hs biological process
protein C-terminus binding Hs molecular function
cytoskeletal protein binding Hs molecular function
response to wounding Hs biological process
positive regulation of gene expression Hs biological process
negative regulation of neuron projection development Hs biological process
astrocyte development Hs biological process
intercalated disc Hs cellular component
membrane Hs cellular component
viral process Hs biological process
cytokine-mediated signaling pathway Hs biological process
kinase binding Hs molecular function
protein domain specific binding Hs molecular function
Z disc Hs cellular component
extracellular matrix organization Hs biological process
intracellular ribonucleoprotein complex Hs cellular component
neuron projection regeneration Hs biological process
cell leading edge Hs cellular component
neuromuscular junction Hs cellular component
sarcolemma Hs cellular component
identical protein binding Hs molecular function
cell projection Hs cellular component
neuron projection Hs cellular component
myelin sheath Hs cellular component
contractile fiber Hs cellular component
regulation of mRNA stability Hs biological process
cell body Hs cellular component
intermediate filament organization Hs biological process
intermediate filament cytoskeleton Hs cellular component
phagocytic vesicle Hs cellular component
positive regulation of translation Hs biological process
positive regulation of glial cell proliferation Hs biological process
long-term synaptic potentiation Hs biological process
SMAD protein signal transduction Hs biological process
axon development Hs biological process
extracellular exosome Hs cellular component
cellular response to interferon-gamma Hs biological process
scaffold protein binding Hs molecular function
glial cell projection Hs cellular component
astrocyte projection Hs cellular component
astrocyte end-foot Hs cellular component
cardiac myofibril Hs cellular component
cytoplasmic side of lysosomal membrane Hs cellular component
keratin filament binding Hs molecular function
MAPK cascade Hs biological process
microtubule cytoskeleton organization Hs biological process
Ras guanyl-nucleotide exchange factor activity Hs molecular function
extracellular space Hs cellular component
nucleoplasm Hs cellular component
multicellular organism development Hs biological process
nervous system development Hs biological process
microtubule binding Hs molecular function
anterograde axonal transport Hs biological process
retrograde axonal transport Hs biological process
response to toxic substance Hs biological process
response to organic substance Hs biological process
axonal transport of mitochondrion Hs biological process
spinal cord development Hs biological process
cerebral cortex development Hs biological process
cell differentiation Hs biological process
axon Hs cellular component
growth cone Hs cellular component
protein binding, bridging Hs molecular function
nuclear membrane Hs cellular component
TSC1-TSC2 complex Hs cellular component
cytoplasmic ribonucleoprotein granule Hs cellular component
locomotion Hs biological process
phospholipase binding Hs molecular function
response to peptide hormone Hs biological process
negative regulation of neuron apoptotic process Hs biological process
type III intermediate filament Hs cellular component
intermediate filament cytoskeleton organization Hs biological process
protein heterodimerization activity Hs molecular function
neuron projection morphogenesis Hs biological process
positive regulation of axonogenesis Hs biological process
neuromuscular process controlling balance Hs biological process
protein polymerization Hs biological process
neurofilament cytoskeleton organization Hs biological process
regulation of molecular function Hs biological process
neurofibrillary tangle Hs cellular component
axon cytoplasm Hs cellular component

GO (Blast)

47 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
double-stranded RNA binding Hs molecular function 319 9.97e-104
integrin binding Hs molecular function 279 1.31e-88
structural molecule activity Hs molecular function 319 9.97e-104
structural constituent of cytoskeleton Hs molecular function 319 9.97e-104
structural constituent of eye lens Hs molecular function 319 9.97e-104
protein binding Hs molecular function 319 9.97e-104
intracellular Hs cellular component 279 1.31e-88
nucleus Hs cellular component 276 3.18e-87
cytoplasm Hs cellular component 319 9.97e-104
lysosome Hs cellular component 279 1.31e-88
peroxisome Hs cellular component 319 9.97e-104
cytosol Hs cellular component 319 9.97e-104
polysome Hs cellular component 319 9.97e-104
cytoskeleton Hs cellular component 319 9.97e-104
intermediate filament Hs cellular component 319 9.97e-104
neurofilament Hs cellular component 279 1.31e-88
plasma membrane Hs cellular component 319 9.97e-104
cell-cell junction Hs cellular component 276 3.18e-87
fascia adherens Hs cellular component 276 3.18e-87
focal adhesion Hs cellular component 319 9.97e-104
protein C-terminus binding Hs molecular function 319 9.97e-104
cytoskeletal protein binding Hs molecular function 276 3.18e-87
intercalated disc Hs cellular component 276 3.18e-87
membrane Hs cellular component 279 1.31e-88
kinase binding Hs molecular function 279 1.31e-88
protein domain specific binding Hs molecular function 319 9.97e-104
Z disc Hs cellular component 276 3.18e-87
intracellular ribonucleoprotein complex Hs cellular component 319 9.97e-104
cell leading edge Hs cellular component 319 9.97e-104
neuromuscular junction Hs cellular component 276 3.18e-87
sarcolemma Hs cellular component 276 3.18e-87
identical protein binding Hs molecular function 319 9.97e-104
cell projection Hs cellular component 319 9.97e-104
neuron projection Hs cellular component 319 9.97e-104
myelin sheath Hs cellular component 279 1.31e-88
contractile fiber Hs cellular component 276 3.18e-87
cell body Hs cellular component 279 1.31e-88
intermediate filament cytoskeleton Hs cellular component 279 1.31e-88
phagocytic vesicle Hs cellular component 319 9.97e-104
extracellular exosome Hs cellular component 319 9.97e-104
scaffold protein binding Hs molecular function 319 9.97e-104
glial cell projection Hs cellular component 279 1.31e-88
astrocyte projection Hs cellular component 279 1.31e-88
astrocyte end-foot Hs cellular component 279 1.31e-88
cardiac myofibril Hs cellular component 276 3.18e-87
cytoplasmic side of lysosomal membrane Hs cellular component 279 1.31e-88
keratin filament binding Hs molecular function 319 9.97e-104

GO (InterProScan)

2 results

GO Term Analysis Type e-value
structural molecule activity PANTHER molecular function 7.2E-148
intermediate filament PANTHER cellular component 7.2E-148