Aniseed - Gene card

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

10 results

IPR Term	Analysis	Definition
Helicase_ATP-bd	SMART	Helicase superfamily 1/2, ATP-binding domain
Helicase_C	Pfam	Helicase, C-terminal
Helicase_C	ProSiteProfiles	Helicase, C-terminal
DEAD/DEAH_box_helicase_dom	Pfam	DEAD/DEAH box helicase domain
P-loop_NTPase	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolase
Helicase_C	SMART	Helicase, C-terminal
RNA-helicase_DEAD-box_CS	ProSitePatterns	ATP-dependent RNA helicase DEAD-box, conserved site
Helicase_ATP-bd	ProSiteProfiles	Helicase superfamily 1/2, ATP-binding domain
RNA_helicase_DEAD_Q_motif	ProSiteProfiles	RNA helicase, DEAD-box type, Q motif
Helicase_C	CDD	Helicase, C-terminal

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

20 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nucleotide binding	Hs	molecular function
mRNA splicing, via spliceosome	Hs	biological process
fibrillar center	Hs	cellular component
nucleic acid binding	Hs	molecular function
RNA binding	Hs	molecular function
ATP-dependent RNA helicase activity	Hs	molecular function
helicase activity	Hs	molecular function
ATP binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
nucleolus	Hs	cellular component
cytoplasm	Hs	cellular component
mRNA processing	Hs	biological process
RNA splicing	Hs	biological process
regulation of gene expression	Hs	biological process
RNA secondary structure unwinding	Hs	biological process
Cajal body	Hs	cellular component
membrane	Hs	cellular component
nuclear speck	Hs	cellular component
hydrolase activity	Hs	molecular function

GO (Blast)

35 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleotide binding	Hs	molecular function	1157	0.0
fibrillar center	Hs	cellular component	1157	0.0
nucleic acid binding	Hs	molecular function	1157	0.0
RNA binding	Hs	molecular function	1157	0.0
RNA helicase activity	Hs	molecular function	368	2.80e-114
mRNA 3'-UTR binding	Hs	molecular function	368	2.80e-114
ATP-dependent RNA helicase activity	Hs	molecular function	1157	0.0
helicase activity	Hs	molecular function	1157	0.0
protein binding	Hs	molecular function	399	3.09e-122
calmodulin binding	Hs	molecular function	368	2.80e-114
ATP binding	Hs	molecular function	1157	0.0
nucleus	Hs	cellular component	1157	0.0
nucleoplasm	Hs	cellular component	1157	0.0
spliceosomal complex	Hs	cellular component	368	2.80e-114
nucleolus	Hs	cellular component	1157	0.0
cytoplasm	Hs	cellular component	1157	0.0
cytosol	Hs	cellular component	399	3.09e-122
Cajal body	Hs	cellular component	1157	0.0
membrane	Hs	cellular component	1157	0.0
nuclear speck	Hs	cellular component	1157	0.0
hydrolase activity	Hs	molecular function	1157	0.0
enzyme binding	Hs	molecular function	368	2.80e-114
intracellular ribonucleoprotein complex	Hs	cellular component	368	2.80e-114
MH2 domain binding	Hs	molecular function	368	2.80e-114
pre-mRNA binding	Hs	molecular function	368	2.80e-114
ribonucleoprotein complex binding	Hs	molecular function	368	2.80e-114
SMAD binding	Hs	molecular function	368	2.80e-114
calcium-dependent protein binding	Hs	molecular function	368	2.80e-114
androgen receptor binding	Hs	molecular function	368	2.80e-114
extracellular exosome	Hs	cellular component	368	2.80e-114
R-SMAD binding	Hs	molecular function	368	2.80e-114
primary miRNA binding	Hs	molecular function	368	2.80e-114
catalytic step 2 spliceosome	Hs	cellular component	368	2.80e-114
SMAD protein complex	Hs	cellular component	368	2.80e-114
promoter-specific chromatin binding	Hs	molecular function	368	2.80e-114

GO (InterProScan)

2 results

GO Term	Analysis	Type	e-value
nucleic acid binding	Pfam	molecular function	3.2E-50
ATP binding	Pfam	molecular function	3.2E-50

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location

Transcript Models and Sequences

External database links

Regulatory Regions

InterPro

GOSlim

GO (Orthology)

GO (Blast)

GO (InterProScan)