Aniseed - Gene card

Gene Card

Best human hits

KHDRBS2; KHDRBS3; QKI

Species

H.aurantium

Unique Gene ID

Haaura.g00002460

Gene Model ID

Haaura.CG.MTP2014.S132.g02460

Location

S132:53371..64879

Transcript Models and Sequences

Haaura.CG.MTP2014.S132.g02460.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term	Analysis	Definition
KH_dom_type_1_sf	SUPERFAMILY	K Homology domain, type 1 superfamily
KH_dom	SMART	K Homology domain
GLD-1	PANTHER	STAR-domain RNA-binding protein GLD-1
KH_dom_type_1_sf	Gene3D	K Homology domain, type 1 superfamily
KH_dom_type_1	Pfam	K Homology domain, type 1

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

21 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
vasculogenesis	Hs	biological process
nucleic acid binding	Hs	molecular function
RNA binding	Hs	molecular function
mRNA binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
cytoplasm	Hs	cellular component
mRNA processing	Hs	biological process
regulation of translation	Hs	biological process
multicellular organism development	Hs	biological process
spermatid development	Hs	biological process
axon ensheathment	Hs	biological process
RNA splicing	Hs	biological process
positive regulation of gene expression	Hs	biological process
SH3 domain binding	Hs	molecular function
cell differentiation	Hs	biological process
myelination	Hs	biological process
muscle cell differentiation	Hs	biological process
long-chain fatty acid biosynthetic process	Hs	biological process
mRNA transport	Hs	biological process
3'-UTR-mediated mRNA destabilization	Hs	biological process

GO (Blast)

14 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleic acid binding	Hs	molecular function	269	1.61e-89
RNA binding	Hs	molecular function	269	1.61e-89
mRNA binding	Hs	molecular function	269	1.61e-89
protein binding	Hs	molecular function	269	1.61e-89
nucleus	Hs	cellular component	269	1.61e-89
nucleoplasm	Hs	cellular component	122	1.04e-32
cytoplasm	Hs	cellular component	269	1.61e-89
poly(A) binding	Hs	molecular function	122	1.04e-32
poly(U) RNA binding	Hs	molecular function	122	1.04e-32
SH3 domain binding	Hs	molecular function	269	1.61e-89
protein domain specific binding	Hs	molecular function	119	1.27e-31
SH2 domain binding	Hs	molecular function	122	1.04e-32
identical protein binding	Hs	molecular function	122	1.04e-32
protein heterodimerization activity	Hs	molecular function	122	1.04e-32

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
nucleic acid binding	SMART	molecular function	3.4E-9
RNA binding	Gene3D	molecular function	3.4E-67
regulation of translation	PANTHER	biological process	6.4E-87