Gene Card
Best human hits
SRSF1; SRSF3; SRSF7
Species
Unique Gene ID
Harore.g00001023
Gene Model ID
Harore.CG.MTP2014.S31.g01023
Location
S31:363182..365044
Transcript Models and Sequences
Harore.CG.MTP2014.S31.g01023.01.t
Harore.CG.MTP2014.S31.g01023.02.t
n/a
You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see how you can interact with this tree
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
5 results
| IPR Term | Analysis | Definition |
|---|---|---|
| RRM_dom | SMART | RNA recognition motif domain |
| RRM_dom | Pfam | RNA recognition motif domain |
| Nucleotide-bd_a/b_plait_sf | Gene3D | Nucleotide-binding alpha-beta plait domain superfamily |
| RRM_dom | ProSiteProfiles | RNA recognition motif domain |
| RBD_domain_sf | SUPERFAMILY | RNA-binding domain superfamily |
GOSlim
14 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| nucleic acid binding | Blast | molecular function |
| RNA binding | Blast | molecular function |
| protein binding | Blast | molecular function |
| nucleus | Blast | cellular component |
| nucleoplasm | Blast | cellular component |
| cytoplasm | Blast | cellular component |
| zinc ion binding | Blast | molecular function |
| nuclear speck | Blast | cellular component |
| metal ion binding | Blast | molecular function |
| extracellular exosome | Blast | cellular component |
| nuclear part | Blast | cellular component |
| macromolecular complex | Blast | cellular component |
| enzyme binding | Blast | molecular function |
| protein kinase binding | Blast | molecular function |
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|
GO (Blast)
20 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| nucleic acid binding | Hs | molecular function | 127 | 9.78e-38 |
| RNA binding | Hs | molecular function | 127 | 9.78e-38 |
| mRNA binding | Hs | molecular function | 62.4 | 5.59e-12 |
| protein binding | Hs | molecular function | 127 | 9.78e-38 |
| nucleus | Hs | cellular component | 127 | 9.78e-38 |
| nucleoplasm | Hs | cellular component | 127 | 9.78e-38 |
| spliceosomal complex | Hs | cellular component | 62.4 | 5.59e-12 |
| cytoplasm | Hs | cellular component | 127 | 9.78e-38 |
| zinc ion binding | Hs | molecular function | 117 | 5.05e-33 |
| nuclear speck | Hs | cellular component | 127 | 9.78e-38 |
| protein domain specific binding | Hs | molecular function | 117 | 5.05e-33 |
| exon-exon junction complex | Hs | cellular component | 62.4 | 5.59e-12 |
| phospholipase binding | Hs | molecular function | 127 | 9.78e-38 |
| protein kinase B binding | Hs | molecular function | 62.4 | 5.59e-12 |
| DNA topoisomerase binding | Hs | molecular function | 62.4 | 5.59e-12 |
| metal ion binding | Hs | molecular function | 117 | 5.05e-33 |
| RS domain binding | Hs | molecular function | 62.4 | 5.59e-12 |
| extracellular exosome | Hs | cellular component | 117 | 5.05e-33 |
| catalytic step 2 spliceosome | Hs | cellular component | 62.4 | 5.59e-12 |
| sequence-specific mRNA binding | Hs | molecular function | 127 | 9.78e-38 |
GO (InterProScan)
1 result
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| nucleic acid binding | SUPERFAMILY | molecular function | 4.16E-23 |
