Gene Card
Best human hits
DKC1; TRUB1
Species
Unique Gene ID
Harore.g00001215
Gene Model ID
Harore.CG.MTP2014.S27.g01215
Location
S27:259404..264529
Transcript Models and Sequences
Harore.CG.MTP2014.S27.g01215.01.t
Harore.CG.MTP2014.S27.g01215.02.t
Harore.CG.MTP2014.S27.g01215.03.t
Harore.CG.MTP2014.S27.g01215.04.t
n/a
You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see how you can interact with this tree
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
12 results
| IPR Term | Analysis | Definition |
|---|---|---|
| tRNA_PsdUridine_synth_B_fam | TIGRFAM | tRNA pseudouridine synthase B family |
| TruB_C | Pfam | tRNA pseudouridylate synthase B, C-terminal |
| PsdUridine_synth_cat_dom_sf | SUPERFAMILY | Pseudouridine synthase, catalytic domain superfamily |
| PUA | ProSiteProfiles | PUA domain |
| tRNA_PsdUridine_synth_B_fam | PANTHER | tRNA pseudouridine synthase B family |
| Uncharacterised_CHP00451 | TIGRFAM | Uncharacterised domain CHP00451 |
| PUA | SMART | PUA domain |
| Dyskerin-like | SMART | Dyskerin-like |
| Dyskerin-like | Pfam | Dyskerin-like |
| PUA | Pfam | PUA domain |
| PUA-like_sf | SUPERFAMILY | PUA-like superfamily |
| PsdUridine_synth_N | Pfam | Pseudouridine synthase II, N-terminal |
GOSlim
20 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| RNA binding | Orthology | molecular function |
| protein binding | Orthology | molecular function |
| nucleus | Orthology | cellular component |
| nucleoplasm | Orthology | cellular component |
| nucleolus | Orthology | cellular component |
| cytoplasm | Orthology | cellular component |
| mitochondrion | Blast | cellular component |
| RNA processing | Orthology | biological process |
| cell proliferation | Orthology | biological process |
| membrane | Orthology | cellular component |
| integral component of membrane | Orthology | cellular component |
| RNA metabolic process | Orthology | biological process |
| transferase activity, transferring phosphorus-containing groups | Orthology | molecular function |
| DNA metabolic process | Orthology | biological process |
| nuclear part | Orthology | cellular component |
| macromolecular complex | Orthology | cellular component |
| organelle organization | Orthology | biological process |
| catalytic activity | Orthology | molecular function |
| nuclear body | Orthology | cellular component |
| mRNA metabolic process | Orthology | biological process |
GO (Orthology)
33 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| box H/ACA snoRNA 3'-end processing | Hs | biological process |
| pseudouridine synthesis | Hs | biological process |
| fibrillar center | Hs | cellular component |
| telomerase activity | Hs | molecular function |
| RNA binding | Hs | molecular function |
| protein binding | Hs | molecular function |
| nucleus | Hs | cellular component |
| nucleoplasm | Hs | cellular component |
| telomerase holoenzyme complex | Hs | cellular component |
| nucleolus | Hs | cellular component |
| cytoplasm | Hs | cellular component |
| rRNA processing | Hs | biological process |
| RNA processing | Hs | biological process |
| telomere maintenance via telomerase | Hs | biological process |
| cell proliferation | Hs | biological process |
| RNA modification | Hs | biological process |
| pseudouridine synthase activity | Hs | molecular function |
| Cajal body | Hs | cellular component |
| membrane | Hs | cellular component |
| integral component of membrane | Hs | cellular component |
| isomerase activity | Hs | molecular function |
| intracellular ribonucleoprotein complex | Hs | cellular component |
| rRNA pseudouridine synthesis | Hs | biological process |
| snRNA pseudouridine synthesis | Hs | biological process |
| box H/ACA snoRNP complex | Hs | cellular component |
| positive regulation of telomere maintenance via telomerase | Hs | biological process |
| box H/ACA snoRNA binding | Hs | molecular function |
| ribosome biogenesis | Hs | biological process |
| telomerase RNA binding | Hs | molecular function |
| box H/ACA scaRNP complex | Hs | cellular component |
| box H/ACA telomerase RNP complex | Hs | cellular component |
| positive regulation of telomerase RNA localization to Cajal body | Hs | biological process |
| mRNA pseudouridine synthesis | Hs | biological process |
GO (Blast)
21 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| fibrillar center | Hs | cellular component | 655 | 0.0 |
| telomerase activity | Hs | molecular function | 655 | 0.0 |
| RNA binding | Hs | molecular function | 655 | 0.0 |
| protein binding | Hs | molecular function | 655 | 0.0 |
| nucleus | Hs | cellular component | 655 | 0.0 |
| nucleoplasm | Hs | cellular component | 655 | 0.0 |
| telomerase holoenzyme complex | Hs | cellular component | 655 | 0.0 |
| nucleolus | Hs | cellular component | 655 | 0.0 |
| cytoplasm | Hs | cellular component | 655 | 0.0 |
| mitochondrion | Hs | cellular component | 72.8 | 8.87e-14 |
| pseudouridine synthase activity | Hs | molecular function | 655 | 0.0 |
| Cajal body | Hs | cellular component | 655 | 0.0 |
| membrane | Hs | cellular component | 655 | 0.0 |
| integral component of membrane | Hs | cellular component | 655 | 0.0 |
| isomerase activity | Hs | molecular function | 655 | 0.0 |
| intracellular ribonucleoprotein complex | Hs | cellular component | 655 | 0.0 |
| box H/ACA snoRNP complex | Hs | cellular component | 655 | 0.0 |
| box H/ACA snoRNA binding | Hs | molecular function | 655 | 0.0 |
| telomerase RNA binding | Hs | molecular function | 655 | 0.0 |
| box H/ACA scaRNP complex | Hs | cellular component | 655 | 0.0 |
| box H/ACA telomerase RNP complex | Hs | cellular component | 655 | 0.0 |
GO (InterProScan)
5 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| pseudouridine synthesis | SUPERFAMILY | biological process | 4.8E-77 |
| RNA binding | SUPERFAMILY | molecular function | 4.8E-77 |
| RNA processing | PANTHER | biological process | 5.9E-243 |
| RNA modification | SUPERFAMILY | biological process | 4.8E-77 |
| pseudouridine synthase activity | SUPERFAMILY | molecular function | 4.8E-77 |
