Aniseed - Gene card

Gene Card

Best human hits

SOX14; SOX2; SOX21

Species

H.roretzi

Unique Gene ID

Harore.g00004234

Gene Model ID

Harore.CG.MTP2014.S474.g04234

Location

S474:37153..39190

Transcript Models and Sequences

Harore.CG.MTP2014.S474.g04234.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term	Analysis	Definition
HMG_box_dom	ProSiteProfiles	High mobility group box domain
HMG_box_dom_sf	Gene3D	High mobility group box domain superfamily
SOX_fam	Pfam	Transcription factor SOX
HMG_box_dom_sf	SUPERFAMILY	High mobility group box domain superfamily
HMG_box_dom	SMART	High mobility group box domain
HMG_box_dom	Pfam	High mobility group box domain

GOSlim

58 results

GO Term	Annotation Origin	Type
negative regulation of transcription from RNA polymerase II promoter	Orthology	biological process
transcription regulatory region sequence-specific DNA binding	Orthology	molecular function
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Orthology	molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
DNA binding	Orthology	molecular function
chromatin binding	Orthology	molecular function
transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
cytoplasm	Orthology	cellular component
cytosol	Orthology	cellular component
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
regulation of transcription from RNA polymerase II promoter	Orthology	biological process
transcription from RNA polymerase II promoter	Orthology	biological process
multicellular organism development	Orthology	biological process
nervous system development	Orthology	biological process
response to wounding	Orthology	biological process
regulation of gene expression	Orthology	biological process
cytokine-mediated signaling pathway	Orthology	biological process
sequence-specific DNA binding	Orthology	molecular function
transcription regulatory region DNA binding	Orthology	molecular function
positive regulation of transcription, DNA-templated	Orthology	biological process
positive regulation of transcription from RNA polymerase II promoter	Orthology	biological process
protein heterodimerization activity	Orthology	molecular function
negative regulation of canonical Wnt signaling pathway	Orthology	biological process
central nervous system development	Orthology	biological process
cell differentiation	Orthology	biological process
negative regulation of nucleic acid-templated transcription	Orthology	biological process
animal organ development	Orthology	biological process
anatomical structure formation involved in morphogenesis	Orthology	biological process
intracellular part	Orthology	cellular component
macromolecular complex	Orthology	cellular component
organelle organization	Orthology	biological process
brain development	Orthology	biological process
cell adhesion	Orthology	biological process
developmental process	Orthology	biological process
RNA binding	Orthology	molecular function
anatomical structure development	Orthology	biological process
wound healing	Orthology	biological process
endopeptidase activity	Orthology	molecular function
regulation of apoptotic process	Orthology	biological process
intracellular signal transduction	Orthology	biological process
positive regulation of signal transduction	Orthology	biological process
protein phosphorylation	Orthology	biological process
nuclear part	Orthology	cellular component
cell development	Orthology	biological process
neuron differentiation	Orthology	biological process
negative regulation of cell proliferation	Orthology	biological process
response to organic substance	Orthology	biological process
RNA polymerase II regulatory region sequence-specific DNA binding	Orthology	molecular function
cell migration	Orthology	biological process
generation of neurons	Orthology	biological process
anatomical structure morphogenesis	Orthology	biological process
reproductive process	Orthology	biological process
neuron development	Orthology	biological process
head development	Orthology	biological process

GO (Orthology)

68 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
negative regulation of transcription from RNA polymerase II promoter	Hs	biological process
transcription regulatory region sequence-specific DNA binding	Hs	molecular function
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function
osteoblast differentiation	Hs	biological process
eye development	Hs	biological process
endodermal cell fate specification	Hs	biological process
DNA binding	Hs	molecular function
chromatin binding	Hs	molecular function
transcription factor activity, sequence-specific DNA binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
transcription factor complex	Hs	cellular component
cytoplasm	Hs	cellular component
cytosol	Hs	cellular component
chromatin organization	Hs	biological process
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
regulation of transcription from RNA polymerase II promoter	Hs	biological process
transcription from RNA polymerase II promoter	Hs	biological process
cell cycle arrest	Hs	biological process
multicellular organism development	Hs	biological process
nervous system development	Hs	biological process
response to wounding	Hs	biological process
regulation of gene expression	Hs	biological process
cytokine-mediated signaling pathway	Hs	biological process
pituitary gland development	Hs	biological process
adenohypophysis development	Hs	biological process
positive regulation of cell-cell adhesion	Hs	biological process
forebrain development	Hs	biological process
somatic stem cell population maintenance	Hs	biological process
miRNA binding	Hs	molecular function
tissue regeneration	Hs	biological process
regulation of cysteine-type endopeptidase activity involved in apoptotic process	Hs	biological process
positive regulation of MAPK cascade	Hs	biological process
sequence-specific DNA binding	Hs	molecular function
transcription regulatory region DNA binding	Hs	molecular function
nuclear transcription factor complex	Hs	cellular component
positive regulation of cell differentiation	Hs	biological process
negative regulation of neuron differentiation	Hs	biological process
positive regulation of transcription, DNA-templated	Hs	biological process
positive regulation of transcription from RNA polymerase II promoter	Hs	biological process
protein heterodimerization activity	Hs	molecular function
inner ear development	Hs	biological process
negative regulation of epithelial cell proliferation	Hs	biological process
response to growth factor	Hs	biological process
negative regulation of canonical Wnt signaling pathway	Hs	biological process
neuronal stem cell population maintenance	Hs	biological process
RNA polymerase II core promoter sequence-specific DNA binding	Hs	molecular function
core promoter sequence-specific DNA binding	Hs	molecular function
RNA polymerase II transcription corepressor activity	Hs	molecular function
neuron migration	Hs	biological process
lens morphogenesis in camera-type eye	Hs	biological process
central nervous system development	Hs	biological process
sensory organ development	Hs	biological process
sex determination	Hs	biological process
male gonad development	Hs	biological process
ventral spinal cord interneuron specification	Hs	biological process
hypothalamus development	Hs	biological process
forebrain neuron differentiation	Hs	biological process
forebrain neuron development	Hs	biological process
cell differentiation	Hs	biological process
negative regulation of striated muscle tissue development	Hs	biological process
myoblast development	Hs	biological process
face development	Hs	biological process
negative regulation of nucleic acid-templated transcription	Hs	biological process

GO (Blast)

18 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
transcription regulatory region sequence-specific DNA binding	Hs	molecular function	172	4.83e-50
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function	151	1.71e-42
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	172	4.83e-50
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function	172	4.83e-50
DNA binding	Hs	molecular function	172	4.83e-50
chromatin binding	Hs	molecular function	152	1.45e-43
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	172	4.83e-50
protein binding	Hs	molecular function	172	4.83e-50
nucleus	Hs	cellular component	172	4.83e-50
nucleoplasm	Hs	cellular component	172	4.83e-50
transcription factor complex	Hs	cellular component	172	4.83e-50
cytoplasm	Hs	cellular component	172	4.83e-50
cytosol	Hs	cellular component	172	4.83e-50
miRNA binding	Hs	molecular function	172	4.83e-50
sequence-specific DNA binding	Hs	molecular function	172	4.83e-50
transcription regulatory region DNA binding	Hs	molecular function	172	4.83e-50
nuclear transcription factor complex	Hs	cellular component	152	1.45e-43
protein heterodimerization activity	Hs	molecular function	152	1.45e-43

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
regulation of transcription, DNA-templated	Pfam	biological process	1.8E-8