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GENE CARD

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  1. Gene 'Harore.CG.MTP2014.S1...'

Gene Card

Best human hits

TP53BP1

Species

H.roretzi

Unique Gene ID

Harore.g00004273

Gene Model ID

Harore.CG.MTP2014.S107.g04273

Location

S107:238921..252177

Transcript Models and Sequences

  Harore.CG.MTP2014.S107.g04273.01.t

External Database Gene Card

External database links

No result

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WashU Genome Browser

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Genomicus Synteny Browser

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Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
BRCT_dom_sf Gene3D BRCT domain superfamily
BRCT_dom ProSiteProfiles BRCT domain
BRCT_dom CDD BRCT domain
BRCT_dom_sf SUPERFAMILY BRCT domain superfamily
53-BP1_Tudor Pfam Tumour suppressor p53-binding protein-1 Tudor domain
BRCT_dom SMART BRCT domain

GOSlim

12 results

GO Term Annotation Origin Type
DNA binding Blast molecular function
protein binding Blast molecular function
nucleus Blast cellular component
nucleoplasm Blast cellular component
cytoplasm Blast cellular component
nuclear body Blast cellular component
sequence-specific DNA binding Blast molecular function
intracellular organelle part Blast cellular component
intracellular non-membrane-bounded organelle Blast cellular component
macromolecular complex Blast cellular component
nuclear lumen Blast cellular component
transcription factor binding Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

23 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
chromosome, centromeric region Hs cellular component 194 8.52e-50
kinetochore Hs cellular component 194 8.52e-50
condensed chromosome kinetochore Hs cellular component 194 8.52e-50
chromosome, telomeric region Hs cellular component 194 8.52e-50
nuclear chromosome, telomeric region Hs cellular component 194 8.52e-50
RNA polymerase II activating transcription factor binding Hs molecular function 194 8.52e-50
RNA polymerase II transcription cofactor activity Hs molecular function 194 8.52e-50
p53 binding Hs molecular function 194 8.52e-50
DNA binding Hs molecular function 194 8.52e-50
damaged DNA binding Hs molecular function 194 8.52e-50
protein binding Hs molecular function 194 8.52e-50
nucleus Hs cellular component 194 8.52e-50
nucleoplasm Hs cellular component 194 8.52e-50
replication fork Hs cellular component 194 8.52e-50
chromosome Hs cellular component 194 8.52e-50
cytoplasm Hs cellular component 194 8.52e-50
nuclear body Hs cellular component 194 8.52e-50
methylated histone binding Hs molecular function 194 8.52e-50
site of double-strand break Hs cellular component 194 8.52e-50
telomeric DNA binding Hs molecular function 194 8.52e-50
sequence-specific DNA binding Hs molecular function 194 8.52e-50
ubiquitin modification-dependent histone binding Hs molecular function 194 8.52e-50
DNA repair complex Hs cellular component 194 8.52e-50

GO (InterProScan)

No result

GO Term Analysis Type e-value