Aniseed - Gene card

Gene Card

Best human hits

BRD2

Species

H.roretzi

Unique Gene ID

Harore.g00005017

Gene Model ID

Harore.CG.MTP2014.S307.g05017

Location

S307:67465..74526

Transcript Models and Sequences

Harore.CG.MTP2014.S307.g05017.01.t
Harore.CG.MTP2014.S307.g05017.02.t
Harore.CG.MTP2014.S307.g05017.03.t
Harore.CG.MTP2014.S307.g05017.04.t
Harore.CG.MTP2014.S307.g05017.05.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

11 results

IPR Term	Analysis	Definition
Bromodomain	Pfam	Bromodomain
BRD4_CDT	Pfam	Bromodomain protein 4, C-terminal
Bromodomain	PRINTS	Bromodomain
NET_dom	Pfam	NET domain
Bromodomain	ProSiteProfiles	Bromodomain
Bromodomain_CS	ProSitePatterns	Bromodomain, conserved site
Bromodomain-like_sf	Gene3D	Bromodomain-like superfamily
NET_sf	Gene3D	NET domain superfamily
Bromodomain	SMART	Bromodomain
Bromodomain-like_sf	SUPERFAMILY	Bromodomain-like superfamily
NET_dom	ProSiteProfiles	NET domain

GOSlim

32 results

GO Term	Annotation Origin	Type
chromatin binding	Orthology	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
cytoplasm	Orthology	cellular component
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
regulation of transcription from RNA polymerase II promoter	Orthology	biological process
spermatogenesis	Orthology	biological process
nuclear speck	Orthology	cellular component
transcription coactivator activity	Orthology	molecular function
cytosol	Orthology	cellular component
mRNA processing	Orthology	biological process
cellular response to DNA damage stimulus	Orthology	biological process
RNA splicing	Orthology	biological process
cell differentiation	Orthology	biological process
positive regulation of transcription from RNA polymerase II promoter	Orthology	biological process
organelle organization	Orthology	biological process
DNA binding	Orthology	molecular function
intracellular non-membrane-bounded organelle	Orthology	cellular component
nuclear lumen	Orthology	cellular component
enzyme binding	Orthology	molecular function
male gamete generation	Orthology	biological process
G2/M transition of mitotic cell cycle	Orthology	biological process
transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
intracellular signal transduction	Orthology	biological process
positive regulation of signal transduction	Orthology	biological process
regulation of gene expression	Orthology	biological process
defense response	Orthology	biological process
reproductive process	Orthology	biological process
positive regulation of transcription, DNA-templated	Orthology	biological process
protein phosphorylation	Orthology	biological process

GO (Orthology)

37 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
chromatin binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
cytoplasm	Hs	cellular component
chromatin organization	Hs	biological process
nucleosome assembly	Hs	biological process
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
regulation of transcription from RNA polymerase II promoter	Hs	biological process
spermatogenesis	Hs	biological process
nuclear speck	Hs	cellular component
lysine-acetylated histone binding	Hs	molecular function
condensed nuclear chromosome	Hs	cellular component
RNA polymerase II core binding	Hs	molecular function
p53 binding	Hs	molecular function
transcription coactivator activity	Hs	molecular function
chromosome	Hs	cellular component
cytosol	Hs	cellular component
chromatin remodeling	Hs	biological process
mRNA processing	Hs	biological process
cellular response to DNA damage stimulus	Hs	biological process
male meiotic nuclear division	Hs	biological process
male meiosis I	Hs	biological process
RNA splicing	Hs	biological process
positive regulation of G2/M transition of mitotic cell cycle	Hs	biological process
viral process	Hs	biological process
cell differentiation	Hs	biological process
positive regulation of transcription elongation from RNA polymerase II promoter	Hs	biological process
histone binding	Hs	molecular function
positive regulation of I-kappaB kinase/NF-kappaB signaling	Hs	biological process
regulation of RNA splicing	Hs	biological process
positive regulation of transcription from RNA polymerase II promoter	Hs	biological process
regulation of inflammatory response	Hs	biological process
positive regulation of transcription involved in meiotic cell cycle	Hs	biological process
meiotic cell cycle	Hs	biological process
regulation of phosphorylation of RNA polymerase II C-terminal domain	Hs	biological process

GO (Blast)

7 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
chromatin binding	Hs	molecular function	385	9.39e-118
protein binding	Hs	molecular function	385	9.39e-118
nucleus	Hs	cellular component	385	9.39e-118
nucleoplasm	Hs	cellular component	385	9.39e-118
cytoplasm	Hs	cellular component	385	9.39e-118
nuclear speck	Hs	cellular component	385	9.39e-118
lysine-acetylated histone binding	Hs	molecular function	385	9.39e-118

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
protein binding	Gene3D	molecular function	1.5E-42