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Gene Card

Best human hits

HNF4A; HNF4G; RXRA

Species

H.roretzi

Unique Gene ID

Harore.g00005398

Gene Model ID

Harore.CG.MTP2014.S3.g05398

Location

S3:264940..273961

Transcript Models and Sequences

  Harore.CG.MTP2014.S3.g05398.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

11 results

IPR Term Analysis Definition
Nucl_hrmn_rcpt_lig-bd SMART Nuclear hormone receptor, ligand-binding domain
Znf_hrmn_rcpt PRINTS Zinc finger, nuclear hormone receptor-type
Znf_hrmn_rcpt ProSiteProfiles Zinc finger, nuclear hormone receptor-type
ThyrH_rcpt PRINTS Thyroid hormone receptor
Nucl_hrmn_rcpt_lig-bd Pfam Nuclear hormone receptor, ligand-binding domain
Znf_NHR/GATA Gene3D Zinc finger, NHR/GATA-type
NHR_like_dom_sf SUPERFAMILY Nuclear hormone receptor-like domain superfamily
Znf_hrmn_rcpt ProSitePatterns Zinc finger, nuclear hormone receptor-type
Znf_hrmn_rcpt Pfam Zinc finger, nuclear hormone receptor-type
Znf_hrmn_rcpt SMART Zinc finger, nuclear hormone receptor-type
Nuclear_hrmn_rcpt PRINTS Nuclear hormone receptor

GOSlim

34 results

GO Term Annotation Origin Type
RNA polymerase II regulatory region sequence-specific DNA binding Blast molecular function
RNA polymerase II core promoter proximal region sequence-specific DNA binding Blast molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding Blast molecular function
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding Blast molecular function
DNA binding Blast molecular function
double-stranded DNA binding Blast molecular function
transcription factor activity, sequence-specific DNA binding Blast molecular function
transcription coactivator activity Blast molecular function
receptor binding Blast molecular function
protein binding Blast molecular function
nucleus Blast cellular component
nucleoplasm Blast cellular component
cytoplasm Blast cellular component
regulation of transcription, DNA-templated InterProScan biological process
transcription factor binding Blast molecular function
zinc ion binding Blast molecular function
enzyme binding Blast molecular function
macromolecular complex Blast cellular component
protein homodimerization activity Blast molecular function
sequence-specific DNA binding Blast molecular function
transcription regulatory region DNA binding Blast molecular function
metal ion binding Blast molecular function
protein heterodimerization activity Blast molecular function
intracellular non-membrane-bounded organelle Blast cellular component
nuclear lumen Blast cellular component
small molecule binding Blast molecular function
anion binding Blast molecular function
signal transduction Blast biological process
response to lipid Blast biological process
signaling receptor activity Blast molecular function
cellular response to organic substance Blast biological process
chromatin binding Blast molecular function
binding Blast molecular function
nuclear part Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

42 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
nuclear chromatin Hs cellular component 264 3.21e-83
RNA polymerase II regulatory region sequence-specific DNA binding Hs molecular function 264 3.21e-83
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 498 7.26e-175
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 498 7.26e-175
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 498 7.26e-175
RNA polymerase II activating transcription factor binding Hs molecular function 497 8.36e-174
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding Hs molecular function 497 8.36e-174
retinoic acid binding Hs molecular function 264 3.21e-83
DNA binding Hs molecular function 498 7.26e-175
double-stranded DNA binding Hs molecular function 264 3.21e-83
transcription factor activity, sequence-specific DNA binding Hs molecular function 498 7.26e-175
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding Hs molecular function 497 8.36e-174
steroid hormone receptor activity Hs molecular function 498 7.26e-175
retinoic acid receptor activity Hs molecular function 264 3.21e-83
transcription coactivator activity Hs molecular function 264 3.21e-83
nuclear receptor activity Hs molecular function 498 7.26e-175
9-cis retinoic acid receptor activity Hs molecular function 264 3.21e-83
receptor binding Hs molecular function 497 8.36e-174
fatty acid binding Hs molecular function 497 8.36e-174
protein binding Hs molecular function 497 8.36e-174
nucleus Hs cellular component 498 7.26e-175
nucleoplasm Hs cellular component 498 7.26e-175
cytoplasm Hs cellular component 497 8.36e-174
transcription factor binding Hs molecular function 264 3.21e-83
zinc ion binding Hs molecular function 498 7.26e-175
ligand-dependent nuclear receptor binding Hs molecular function 264 3.21e-83
enzyme binding Hs molecular function 264 3.21e-83
chromatin DNA binding Hs molecular function 264 3.21e-83
macromolecular complex Hs cellular component 264 3.21e-83
peptide binding Hs molecular function 264 3.21e-83
protein homodimerization activity Hs molecular function 497 8.36e-174
vitamin D receptor binding Hs molecular function 264 3.21e-83
receptor complex Hs cellular component 264 3.21e-83
sequence-specific DNA binding Hs molecular function 498 7.26e-175
transcription regulatory region DNA binding Hs molecular function 497 8.36e-174
retinoic acid-responsive element binding Hs molecular function 264 3.21e-83
metal ion binding Hs molecular function 498 7.26e-175
protein heterodimerization activity Hs molecular function 264 3.21e-83
DBD domain binding Hs molecular function 264 3.21e-83
LBD domain binding Hs molecular function 264 3.21e-83
vitamin D response element binding Hs molecular function 264 3.21e-83
RNA polymerase II transcription factor complex Hs cellular component 264 3.21e-83

GO (InterProScan)

9 results

GO Term Analysis Type e-value
DNA binding PRINTS molecular function 2.8E-26
transcription factor activity, sequence-specific DNA binding SMART molecular function 8.2E-37
steroid hormone receptor activity PRINTS molecular function 2.8E-26
nucleus SMART cellular component 8.2E-37
regulation of transcription, DNA-templated SMART biological process 3.2E-47
zinc ion binding SMART molecular function 8.2E-37
steroid hormone mediated signaling pathway SMART biological process 3.2E-47
sequence-specific DNA binding SMART molecular function 8.2E-37
thyroid hormone receptor activity PRINTS molecular function 4.5E-6

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