Aniseed - Gene card

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

5 results

IPR Term	Analysis	Definition
EF_hand_dom	ProSiteProfiles	EF-hand domain
EF_hand_dom	CDD	EF-hand domain
EF_Hand_1_Ca_BS	ProSitePatterns	EF-Hand 1, calcium-binding site
EF-hand-dom_pair	SUPERFAMILY	EF-hand domain pair
EF_hand_dom	Pfam	EF-hand domain

GOSlim

45 results

GO Term	Annotation Origin	Type
actin binding	Blast	molecular function
calcium ion binding	Orthology	molecular function
protein binding	Orthology	molecular function
cytoplasm	Orthology	cellular component
Golgi apparatus	Orthology	cellular component
cytosol	Orthology	cellular component
plasma membrane	Orthology	cellular component
signal transduction	Orthology	biological process
membrane	Orthology	cellular component
protein homodimerization activity	Blast	molecular function
metal ion binding	Orthology	molecular function
perinuclear region of cytoplasm	Orthology	cellular component
actin filament binding	Blast	molecular function
Golgi membrane	Orthology	cellular component
extracellular region	Orthology	cellular component
extracellular space	Orthology	cellular component
cytoskeleton	Orthology	cellular component
visual perception	Orthology	biological process
cell junction	Orthology	cellular component
synapse	Orthology	cellular component
postsynaptic membrane	Orthology	cellular component
regulation of molecular function	Orthology	biological process
enzyme regulator activity	Orthology	molecular function
molecular function regulator	Orthology	molecular function
transmembrane transport	Orthology	biological process
cell periphery	Orthology	cellular component
cytoplasmic part	Orthology	cellular component
binding	Orthology	molecular function
cell morphogenesis involved in neuron differentiation	Orthology	biological process
organelle	Orthology	cellular component
postsynapse	Orthology	cellular component
neuron part	Orthology	cellular component
intracellular protein transport	Orthology	biological process
establishment of protein localization to organelle	Orthology	biological process
regulation of catalytic activity	Orthology	biological process
cell projection part	Orthology	cellular component
axon	Orthology	cellular component
synapse part	Orthology	cellular component
neuron development	Orthology	biological process
anatomical structure morphogenesis	Orthology	biological process
animal organ development	Orthology	biological process
cytoskeletal part	Blast	cellular component
macromolecular complex	Blast	cellular component
cytoskeletal protein binding	Blast	molecular function
intracellular non-membrane-bounded organelle	Blast	cellular component

GO (Orthology)

32 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
calcium ion binding	Hs	molecular function
protein binding	Hs	molecular function
cytoplasm	Hs	cellular component
Golgi apparatus	Hs	cellular component
cytosol	Hs	cellular component
plasma membrane	Hs	cellular component
signal transduction	Hs	biological process
membrane	Hs	cellular component
metal ion binding	Hs	molecular function
calcium-dependent protein binding	Hs	molecular function
perinuclear region of cytoplasm	Hs	cellular component
Golgi membrane	Hs	cellular component
enzyme inhibitor activity	Hs	molecular function
calcium channel regulator activity	Hs	molecular function
extracellular region	Hs	cellular component
extracellular space	Hs	cellular component
cytoskeleton	Hs	cellular component
cell cortex	Hs	cellular component
visual perception	Hs	biological process
phototransduction	Hs	biological process
nuclear localization sequence binding	Hs	molecular function
photoreceptor cell morphogenesis	Hs	biological process
postsynaptic density	Hs	cellular component
cell junction	Hs	cellular component
negative regulation of protein import into nucleus	Hs	biological process
negative regulation of catalytic activity	Hs	biological process
terminal bouton	Hs	cellular component
ion channel binding	Hs	molecular function
synapse	Hs	cellular component
postsynaptic membrane	Hs	cellular component
retinal cone cell development	Hs	biological process
regulation of molecular function	Hs	biological process

GO (Blast)

18 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
actin binding	Hs	molecular function	91.3	7.60e-23
calcium ion binding	Hs	molecular function	103	1.46e-27
protein binding	Hs	molecular function	103	1.46e-27
cytoplasm	Hs	cellular component	79.7	6.20e-18
Golgi apparatus	Hs	cellular component	79.7	6.20e-18
cytosol	Hs	cellular component	103	1.46e-27
troponin complex	Hs	cellular component	103	1.46e-27
plasma membrane	Hs	cellular component	79.7	6.20e-18
membrane	Hs	cellular component	79.7	6.20e-18
troponin I binding	Hs	molecular function	103	1.46e-27
troponin T binding	Hs	molecular function	103	1.46e-27
protein homodimerization activity	Hs	molecular function	103	1.46e-27
contractile fiber	Hs	cellular component	103	1.46e-27
metal ion binding	Hs	molecular function	103	1.46e-27
calcium-dependent protein binding	Hs	molecular function	103	1.46e-27
perinuclear region of cytoplasm	Hs	cellular component	79.7	6.20e-18
actin filament binding	Hs	molecular function	103	1.46e-27
cardiac Troponin complex	Hs	cellular component	103	1.46e-27

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
calcium ion binding	CDD	molecular function	1.96562E-10

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location