Aniseed - Gene card

Gene Card

Best human hits

RXFP1; RXFP2; TSHR

Species

H.roretzi

Unique Gene ID

Harore.g00006116

Gene Model ID

Harore.CG.MTP2014.S38.g06116

Location

S38:315863..319252

Transcript Models and Sequences

Harore.CG.MTP2014.S38.g06116.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term	Analysis	Definition
LDrepeatLR_classA_rpt	CDD	Low-density lipoprotein (LDL) receptor class A repeat
TSHR/LHCGR/FSHR	PANTHER	TSH/LHCG/FSH receptor
LDL_receptor-like_sf	SUPERFAMILY	LDL receptor-like superfamily
GPCR_Rhodpsn_7TM	ProSiteProfiles	GPCR, rhodopsin-like, 7TM

GOSlim

15 results

GO Term	Annotation Origin	Type
signal transducer activity	Blast	molecular function
G-protein coupled receptor activity	Blast	molecular function
protein binding	Blast	molecular function
intracellular	Blast	cellular component
plasma membrane	Blast	cellular component
integral component of plasma membrane	Blast	cellular component
cell surface	Blast	cellular component
membrane	Blast	cellular component
integral component of membrane	Blast	cellular component
basolateral plasma membrane	Blast	cellular component
macromolecular complex binding	Blast	molecular function
metal ion binding	Blast	molecular function
binding	Blast	molecular function
signaling receptor activity	Blast	molecular function
macromolecular complex	Blast	cellular component

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

19 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
signal transducer activity	Hs	molecular function	63.9	6.73e-11
receptor activity	Hs	molecular function	51.6	6.07e-07
G-protein coupled receptor activity	Hs	molecular function	63.9	6.73e-11
thyroid-stimulating hormone receptor activity	Hs	molecular function	51.6	6.07e-07
protein binding	Hs	molecular function	63.9	6.73e-11
intracellular	Hs	cellular component	63.5	9.95e-11
plasma membrane	Hs	cellular component	63.9	6.73e-11
integral component of plasma membrane	Hs	cellular component	51.6	6.07e-07
G-protein coupled peptide receptor activity	Hs	molecular function	51.6	6.07e-07
cell surface	Hs	cellular component	51.6	6.07e-07
membrane	Hs	cellular component	63.9	6.73e-11
integral component of membrane	Hs	cellular component	63.9	6.73e-11
basolateral plasma membrane	Hs	cellular component	51.6	6.07e-07
protein-hormone receptor activity	Hs	molecular function	63.5	9.95e-11
peptide hormone binding	Hs	molecular function	63.5	9.95e-11
hormone binding	Hs	molecular function	63.9	6.73e-11
receptor complex	Hs	cellular component	51.6	6.07e-07
macromolecular complex binding	Hs	molecular function	51.6	6.07e-07
metal ion binding	Hs	molecular function	63.9	6.73e-11

GO (InterProScan)

2 results

GO Term	Analysis	Type	e-value
protein binding	SUPERFAMILY	molecular function	2.45E-5
integral component of membrane	ProSiteProfiles	cellular component	9.679