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GENE CARD

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Gene Card

Best human hits

IARS; IARS2; VARS

Species

H.roretzi

Unique Gene ID

Harore.g00006252

Gene Model ID

Harore.CG.MTP2014.S321.g06252

Location

S321:56602..62967

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

17 results

IPR Term Analysis Definition
CREPT Pfam Cell-cycle alteration and expression-elevated protein in tumour
RNA_pol_II-bd Pfam RNA polymerase II-binding domain
CID_dom ProSiteProfiles CID domain
ENTH_VHS Gene3D ENTH/VHS
CID_dom SMART CID domain
ENTH_VHS SUPERFAMILY ENTH/VHS
Ile-tRNA-ligase_type2 Hamap Isoleucine-tRNA ligase, type 2
tRNAsynth_Ia_anticodon-bd SUPERFAMILY Aminoacyl-tRNA synthetase, class Ia, anticodon-binding
Ile-tRNA-ligase PRINTS Isoleucine-tRNA ligase
M/V/L/I-tRNA-synth_anticd-bd Pfam Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding
Anticodon_Ile_ABEc CDD Isoleucyl tRNA synthetase type 2, anticodon-binding domain
Val/Leu/Ile-tRNA-synth_edit SUPERFAMILY Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain
Ile-tRNA-ligase TIGRFAM Isoleucine-tRNA ligase
Val/Leu/Ile-tRNA-synth_edit Gene3D Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain
aa-tRNA-synth_I_CS ProSitePatterns Aminoacyl-tRNA synthetase, class I, conserved site
aa-tRNA-synth_Ia Pfam Aminoacyl-tRNA synthetase, class Ia
Rossmann-like_a/b/a_fold Gene3D Rossmann-like alpha/beta/alpha sandwich fold

GOSlim

16 results

GO Term Annotation Origin Type
nucleotide binding Blast molecular function
protein binding Blast molecular function
ATP binding Blast molecular function
cytoplasm Blast cellular component
mitochondrion Blast cellular component
mitochondrial matrix Blast cellular component
cytosol Blast cellular component
membrane Blast cellular component
ligase activity Blast molecular function
extracellular exosome Blast cellular component
RNA binding Blast molecular function
RNA metabolic process Blast biological process
hydrolase activity Blast molecular function
intracellular part Blast cellular component
macromolecular complex Blast cellular component
enzyme binding Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

17 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
tRNA binding Hs molecular function 1601 0.0
nucleotide binding Hs molecular function 1601 0.0
aminoacyl-tRNA editing activity Hs molecular function 1601 0.0
aminoacyl-tRNA ligase activity Hs molecular function 1601 0.0
isoleucine-tRNA ligase activity Hs molecular function 1601 0.0
valine-tRNA ligase activity Hs molecular function 160 8.08e-40
protein binding Hs molecular function 1601 0.0
ATP binding Hs molecular function 1601 0.0
cytoplasm Hs cellular component 1601 0.0
mitochondrion Hs cellular component 257 1.31e-70
mitochondrial matrix Hs cellular component 257 1.31e-70
cytosol Hs cellular component 1601 0.0
membrane Hs cellular component 1601 0.0
ligase activity Hs molecular function 1601 0.0
aminoacyl-tRNA synthetase multienzyme complex Hs cellular component 1601 0.0
GTPase binding Hs molecular function 1601 0.0
extracellular exosome Hs cellular component 1601 0.0

GO (InterProScan)

9 results

GO Term Analysis Type e-value
tRNA binding CDD molecular function 2.35319E-89
nucleotide binding TIGRFAM molecular function 2.9E-283
aminoacyl-tRNA editing activity Gene3D molecular function 1.1E-233
aminoacyl-tRNA ligase activity Pfam molecular function 1.7E-231
isoleucine-tRNA ligase activity TIGRFAM molecular function 2.9E-283
ATP binding TIGRFAM molecular function 2.9E-283
cytoplasm TIGRFAM cellular component 2.9E-283
tRNA aminoacylation for protein translation Gene3D biological process 1.1E-233
isoleucyl-tRNA aminoacylation TIGRFAM biological process 2.9E-283