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GENE CARD

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Gene Card

Best human hits

CSMD1; SELE; SELP

Species

H.roretzi

Unique Gene ID

Harore.g00011909

Gene Model ID

Harore.CG.MTP2014.S18.g11909

Location

S18:250628..256253

Transcript Models and Sequences

  Harore.CG.MTP2014.S18.g11909.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

10 results

IPR Term Analysis Definition
Sushi_SCR_CCP_dom CDD Sushi/SCR/CCP domain
Sushi_SCR_CCP_dom ProSiteProfiles Sushi/SCR/CCP domain
Sushi/SCR/CCP_sf SUPERFAMILY Sushi/SCR/CCP superfamily
VWF_A SMART von Willebrand factor, type A
vWFA_dom_sf SUPERFAMILY von Willebrand factor A-like domain superfamily
vWFA_dom_sf Gene3D von Willebrand factor A-like domain superfamily
Sushi_SCR_CCP_dom Pfam Sushi/SCR/CCP domain
VWF_A ProSiteProfiles von Willebrand factor, type A
VWF_A Pfam von Willebrand factor, type A
Sushi_SCR_CCP_dom SMART Sushi/SCR/CCP domain

GOSlim

28 results

GO Term Annotation Origin Type
transmembrane signaling receptor activity Blast molecular function
calcium ion binding Blast molecular function
protein binding Blast molecular function
extracellular space Blast cellular component
plasma membrane Blast cellular component
integral component of plasma membrane Blast cellular component
membrane Blast cellular component
integral component of membrane Blast cellular component
membrane raft Blast cellular component
metal ion binding Blast molecular function
perinuclear region of cytoplasm Blast cellular component
carbohydrate derivative binding Blast molecular function
plasma membrane region Blast cellular component
membrane part Blast cellular component
endomembrane system Blast cellular component
anion binding Blast molecular function
plasma membrane part Blast cellular component
cell surface Blast cellular component
binding Blast molecular function
cytoplasmic part Blast cellular component
cell periphery Blast cellular component
cytoskeleton Blast cellular component
whole membrane Blast cellular component
intracellular organelle part Blast cellular component
cytoplasmic vesicle Blast cellular component
bounding membrane of organelle Blast cellular component
small molecule binding Blast molecular function
enzyme binding Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

26 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
lipopolysaccharide binding Hs molecular function 163 3.93e-41
transmembrane signaling receptor activity Hs molecular function 158 2.55e-40
calcium ion binding Hs molecular function 163 3.93e-41
protein binding Hs molecular function 163 3.93e-41
extracellular space Hs cellular component 163 3.93e-41
plasma membrane Hs cellular component 163 3.93e-41
integral component of plasma membrane Hs cellular component 163 3.93e-41
caveola Hs cellular component 158 2.55e-40
clathrin-coated pit Hs cellular component 158 2.55e-40
heparin binding Hs molecular function 163 3.93e-41
external side of plasma membrane Hs cellular component 163 3.93e-41
membrane Hs cellular component 163 3.93e-41
integral component of membrane Hs cellular component 163 3.93e-41
carbohydrate binding Hs molecular function 163 3.93e-41
cortical cytoskeleton Hs cellular component 158 2.55e-40
platelet dense granule membrane Hs cellular component 163 3.93e-41
platelet alpha granule membrane Hs cellular component 163 3.93e-41
sialic acid binding Hs molecular function 163 3.93e-41
fucose binding Hs molecular function 163 3.93e-41
glycosphingolipid binding Hs molecular function 163 3.93e-41
phospholipase binding Hs molecular function 158 2.55e-40
membrane raft Hs cellular component 158 2.55e-40
metal ion binding Hs molecular function 163 3.93e-41
calcium-dependent protein binding Hs molecular function 163 3.93e-41
perinuclear region of cytoplasm Hs cellular component 158 2.55e-40
oligosaccharide binding Hs molecular function 163 3.93e-41

GO (InterProScan)

No result

GO Term Analysis Type e-value