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Gene Card

Best human hits

PDCD6; PEF1; SRI

Species

H.roretzi

Unique Gene ID

Harore.g00013197

Gene Model ID

Harore.CG.MTP2014.S66.g13197

Location

S66:331317..334055

Transcript Models and Sequences

  Harore.CG.MTP2014.S66.g13197.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
EF_hand_dom ProSiteProfiles EF-hand domain
EF_hand_dom Pfam EF-hand domain
EF-hand-dom_pair SUPERFAMILY EF-hand domain pair
EF_hand_dom SMART EF-hand domain
EF_Hand_1_Ca_BS ProSitePatterns EF-Hand 1, calcium-binding site

GOSlim

47 results

GO Term Annotation Origin Type
Golgi membrane Blast cellular component
magnesium ion binding Blast molecular function
RNA binding Blast molecular function
receptor binding Blast molecular function
calcium ion binding Blast molecular function
protein binding Blast molecular function
intracellular Blast cellular component
nucleus Blast cellular component
nucleoplasm Blast cellular component
cytoplasm Blast cellular component
mitochondrion Blast cellular component
endosome Blast cellular component
endoplasmic reticulum Blast cellular component
endoplasmic reticulum membrane Blast cellular component
cytosol Blast cellular component
plasma membrane Blast cellular component
membrane Blast cellular component
axon Blast cellular component
cytoplasmic vesicle Blast cellular component
vesicle Blast cellular component
identical protein binding Blast molecular function
protein homodimerization activity Blast molecular function
metal ion binding Blast molecular function
protein heterodimerization activity Blast molecular function
protein dimerization activity Blast molecular function
extracellular exosome Blast cellular component
enzyme binding Blast molecular function
endopeptidase activity Blast molecular function
molecular function regulator Blast molecular function
transmembrane transport Blast biological process
whole membrane Blast cellular component
bounding membrane of organelle Blast cellular component
intracellular organelle part Blast cellular component
endomembrane system Blast cellular component
organelle part Blast cellular component
cytoplasmic part Blast cellular component
intracellular non-membrane-bounded organelle Blast cellular component
membrane part Blast cellular component
macromolecular complex Blast cellular component
plasma membrane part Blast cellular component
intracellular part Blast cellular component
cell projection part Blast cellular component
synapse part Blast cellular component
postsynapse Blast cellular component
binding Blast molecular function
transcription factor binding Blast molecular function
endoplasmic reticulum part Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

46 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
Golgi membrane Hs cellular component 164 3.10e-50
magnesium ion binding Hs molecular function 149 2.55e-45
protease binding Hs molecular function 132 9.62e-39
RNA binding Hs molecular function 164 3.10e-50
calcium-dependent cysteine-type endopeptidase activity Hs molecular function 164 3.10e-50
receptor binding Hs molecular function 132 9.62e-39
calcium channel regulator activity Hs molecular function 132 9.62e-39
calcium ion binding Hs molecular function 164 3.10e-50
protein binding Hs molecular function 164 3.10e-50
intracellular Hs cellular component 132 9.62e-39
nucleus Hs cellular component 149 2.55e-45
nucleoplasm Hs cellular component 132 9.62e-39
cytoplasm Hs cellular component 164 3.10e-50
mitochondrion Hs cellular component 132 9.62e-39
endosome Hs cellular component 149 2.55e-45
endoplasmic reticulum Hs cellular component 164 3.10e-50
endoplasmic reticulum membrane Hs cellular component 149 2.55e-45
smooth endoplasmic reticulum Hs cellular component 132 9.62e-39
cytosol Hs cellular component 132 9.62e-39
plasma membrane Hs cellular component 132 9.62e-39
ER to Golgi transport vesicle membrane Hs cellular component 164 3.10e-50
membrane Hs cellular component 164 3.10e-50
sarcoplasmic reticulum Hs cellular component 132 9.62e-39
Z disc Hs cellular component 132 9.62e-39
COPII vesicle coat Hs cellular component 164 3.10e-50
T-tubule Hs cellular component 132 9.62e-39
axon Hs cellular component 132 9.62e-39
cytoplasmic vesicle Hs cellular component 164 3.10e-50
Cul3-RING ubiquitin ligase complex Hs cellular component 164 3.10e-50
vesicle Hs cellular component 132 9.62e-39
sarcoplasmic reticulum membrane Hs cellular component 132 9.62e-39
chromaffin granule membrane Hs cellular component 132 9.62e-39
identical protein binding Hs molecular function 149 2.55e-45
protein homodimerization activity Hs molecular function 149 2.55e-45
protein membrane anchor Hs molecular function 149 2.55e-45
axon terminus Hs cellular component 132 9.62e-39
ion channel binding Hs molecular function 132 9.62e-39
dendritic spine neck Hs cellular component 132 9.62e-39
metal ion binding Hs molecular function 164 3.10e-50
protein heterodimerization activity Hs molecular function 164 3.10e-50
protein dimerization activity Hs molecular function 164 3.10e-50
calcium-dependent protein binding Hs molecular function 164 3.10e-50
molecular adaptor activity Hs molecular function 164 3.10e-50
extracellular exosome Hs cellular component 164 3.10e-50
repressing transcription factor binding Hs molecular function 132 9.62e-39
endoplasmic reticulum exit site Hs cellular component 149 2.55e-45

GO (InterProScan)

1 result

GO Term Analysis Type e-value
calcium ion binding Pfam molecular function 2.1E-11

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