Aniseed - Gene card

External Database Gene Card

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WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

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Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term	Analysis	Definition
MTERF	Pfam	Transcription termination factor, mitochondrial/chloroplastic
MTERF	SMART	Transcription termination factor, mitochondrial/chloroplastic
MTERF_sf	Gene3D	MTERF superfamily, mitochondrial/chloroplastic

GOSlim

19 results

GO Term	Annotation Origin	Type
DNA binding	Orthology	molecular function
double-stranded DNA binding	Orthology	molecular function
RNA binding	Orthology	molecular function
binding	Blast	molecular function
protein binding	Orthology	molecular function
nucleoplasm	Orthology	cellular component
mitochondrion	Orthology	cellular component
mitochondrial matrix	Blast	cellular component
cytosol	Blast	cellular component
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
RNA splicing	Orthology	biological process
developmental process	Orthology	biological process
transcription regulatory region DNA binding	Orthology	molecular function
negative regulation of transcription, DNA-templated	Orthology	biological process
whole membrane	Orthology	cellular component
mitochondrial membrane	Orthology	cellular component
bounding membrane of organelle	Orthology	cellular component
ribosome	Blast	cellular component

GO (Orthology)

17 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
DNA binding	Hs	molecular function
double-stranded DNA binding	Hs	molecular function
single-stranded RNA binding	Hs	molecular function
protein binding	Hs	molecular function
nucleoplasm	Hs	cellular component
mitochondrion	Hs	cellular component
mitochondrial outer membrane	Hs	cellular component
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
RNA splicing	Hs	biological process
macroautophagy	Hs	biological process
rRNA binding	Hs	molecular function
developmental process	Hs	biological process
ribosome biogenesis	Hs	biological process
ribosome assembly	Hs	biological process
transcription regulatory region DNA binding	Hs	molecular function
negative regulation of transcription, DNA-templated	Hs	biological process

GO (Blast)

14 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
DNA binding	Hs	molecular function	177	1.97e-51
double-stranded DNA binding	Hs	molecular function	177	1.97e-51
RNA binding	Hs	molecular function	56.6	8.59e-09
single-stranded RNA binding	Hs	molecular function	177	1.97e-51
binding	Hs	molecular function	56.6	8.59e-09
protein binding	Hs	molecular function	177	1.97e-51
nucleoplasm	Hs	cellular component	177	1.97e-51
mitochondrion	Hs	cellular component	177	1.97e-51
mitochondrial outer membrane	Hs	cellular component	177	1.97e-51
mitochondrial matrix	Hs	cellular component	56.6	8.59e-09
mitochondrial large ribosomal subunit	Hs	cellular component	56.6	8.59e-09
cytosol	Hs	cellular component	56.6	8.59e-09
rRNA binding	Hs	molecular function	177	1.97e-51
transcription regulatory region DNA binding	Hs	molecular function	177	1.97e-51

GO (InterProScan)

2 results

GO Term	Analysis	Type	e-value
double-stranded DNA binding	Pfam	molecular function	2.1E-14
regulation of transcription, DNA-templated	Pfam	biological process	2.1E-14

Gene Card

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