Aniseed - Gene card

External Database Gene Card

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WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

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Gene Phylogeny

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Gene Annotations

InterPro

10 results

IPR Term	Analysis	Definition
DEAD/DEAH_box_helicase_dom	Pfam	DEAD/DEAH box helicase domain
P-loop_NTPase	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolase
Helicase_C	CDD	Helicase, C-terminal
Helicase_ATP-bd	ProSiteProfiles	Helicase superfamily 1/2, ATP-binding domain
Helicase_C	Pfam	Helicase, C-terminal
RNA_helicase_DEAD_Q_motif	ProSiteProfiles	RNA helicase, DEAD-box type, Q motif
Helicase_C	ProSiteProfiles	Helicase, C-terminal
Helicase_C	SMART	Helicase, C-terminal
RNA-helicase_DEAD-box_CS	ProSitePatterns	ATP-dependent RNA helicase DEAD-box, conserved site
Helicase_ATP-bd	SMART	Helicase superfamily 1/2, ATP-binding domain

GOSlim

30 results

GO Term	Annotation Origin	Type
nucleotide binding	Orthology	molecular function
mRNA splicing, via spliceosome	Orthology	biological process
nucleic acid binding	Orthology	molecular function
RNA binding	Orthology	molecular function
protein binding	Blast	molecular function
calmodulin binding	Blast	molecular function
ATP binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
nucleolus	Orthology	cellular component
cytoplasm	Orthology	cellular component
cytosol	Blast	cellular component
mRNA processing	Orthology	biological process
RNA splicing	Orthology	biological process
regulation of gene expression	Orthology	biological process
membrane	Orthology	cellular component
nuclear speck	Orthology	cellular component
hydrolase activity	Orthology	molecular function
enzyme binding	Blast	molecular function
extracellular exosome	Blast	cellular component
nucleoside-triphosphatase activity	Orthology	molecular function
RNA metabolic process	Orthology	biological process
nuclear body	Orthology	cellular component
nuclear part	Blast	cellular component
macromolecular complex	Blast	cellular component
macromolecular complex binding	Blast	molecular function
receptor binding	Blast	molecular function
transcription factor binding	Blast	molecular function
intracellular	Blast	cellular component
chromatin binding	Blast	molecular function

GO (Orthology)

20 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nucleotide binding	Hs	molecular function
mRNA splicing, via spliceosome	Hs	biological process
fibrillar center	Hs	cellular component
nucleic acid binding	Hs	molecular function
RNA binding	Hs	molecular function
ATP-dependent RNA helicase activity	Hs	molecular function
helicase activity	Hs	molecular function
ATP binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
nucleolus	Hs	cellular component
cytoplasm	Hs	cellular component
mRNA processing	Hs	biological process
RNA splicing	Hs	biological process
regulation of gene expression	Hs	biological process
RNA secondary structure unwinding	Hs	biological process
Cajal body	Hs	cellular component
membrane	Hs	cellular component
nuclear speck	Hs	cellular component
hydrolase activity	Hs	molecular function

GO (Blast)

35 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleotide binding	Hs	molecular function	1156	0.0
fibrillar center	Hs	cellular component	1156	0.0
nucleic acid binding	Hs	molecular function	1156	0.0
RNA binding	Hs	molecular function	1156	0.0
RNA helicase activity	Hs	molecular function	370	6.02e-115
mRNA 3'-UTR binding	Hs	molecular function	370	6.02e-115
ATP-dependent RNA helicase activity	Hs	molecular function	1156	0.0
helicase activity	Hs	molecular function	1156	0.0
protein binding	Hs	molecular function	404	3.98e-124
calmodulin binding	Hs	molecular function	370	6.02e-115
ATP binding	Hs	molecular function	1156	0.0
nucleus	Hs	cellular component	1156	0.0
nucleoplasm	Hs	cellular component	1156	0.0
spliceosomal complex	Hs	cellular component	370	6.02e-115
nucleolus	Hs	cellular component	1156	0.0
cytoplasm	Hs	cellular component	1156	0.0
cytosol	Hs	cellular component	404	3.98e-124
Cajal body	Hs	cellular component	1156	0.0
membrane	Hs	cellular component	1156	0.0
nuclear speck	Hs	cellular component	1156	0.0
hydrolase activity	Hs	molecular function	1156	0.0
enzyme binding	Hs	molecular function	370	6.02e-115
intracellular ribonucleoprotein complex	Hs	cellular component	370	6.02e-115
MH2 domain binding	Hs	molecular function	370	6.02e-115
pre-mRNA binding	Hs	molecular function	370	6.02e-115
ribonucleoprotein complex binding	Hs	molecular function	370	6.02e-115
SMAD binding	Hs	molecular function	370	6.02e-115
calcium-dependent protein binding	Hs	molecular function	370	6.02e-115
androgen receptor binding	Hs	molecular function	370	6.02e-115
extracellular exosome	Hs	cellular component	370	6.02e-115
R-SMAD binding	Hs	molecular function	370	6.02e-115
primary miRNA binding	Hs	molecular function	370	6.02e-115
catalytic step 2 spliceosome	Hs	cellular component	370	6.02e-115
SMAD protein complex	Hs	cellular component	370	6.02e-115
promoter-specific chromatin binding	Hs	molecular function	370	6.02e-115

GO (InterProScan)

2 results

GO Term	Analysis	Type	e-value
nucleic acid binding	Pfam	molecular function	4.4E-50
ATP binding	Pfam	molecular function	4.4E-50

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