- Gene 'Moocci.CG.ELv1_2.S37...'
Gene Card
Best human hits
PPIL4; SNRNP35; SNRNP70
Species
Unique Gene ID
Moocci.g00010399
Gene Model ID
Moocci.CG.ELv1_2.S370431.g10399
Location
S370431:56202..63821
Transcript Models and Sequences
Moocci.CG.ELv1_2.S370431.g10399.01.t
Moocci.CG.ELv1_2.S370431.g10399.02.t
Moocci.CG.ELv1_2.S370431.g10399.03.t
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
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You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
7 results
| IPR Term | Analysis | Definition |
|---|---|---|
| U1snRNP70_N | Pfam | U1 small nuclear ribonucleoprotein of 70kDa N-terminal |
| RBD_domain_sf | SUPERFAMILY | RNA-binding domain superfamily |
| RRM_dom | ProSiteProfiles | RNA recognition motif domain |
| RRM_dom | SMART | RNA recognition motif domain |
| Nucleotide-bd_a/b_plait_sf | Gene3D | Nucleotide-binding alpha-beta plait domain superfamily |
| RRM_dom | Pfam | RNA recognition motif domain |
| snRNP70_RRM | CDD | snRNP70, RNA recognition motif |
| GO Term | Annotation Origin | Type |
|---|
GO (Orthology)
25 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| commitment complex | Hs | cellular component |
| mRNA splicing, via spliceosome | Hs | biological process |
| nucleic acid binding | Hs | molecular function |
| RNA binding | Hs | molecular function |
| mRNA binding | Hs | molecular function |
| protein binding | Hs | molecular function |
| nucleus | Hs | cellular component |
| nucleoplasm | Hs | cellular component |
| spliceosomal complex | Hs | cellular component |
| U1 snRNP | Hs | cellular component |
| cytoplasm | Hs | cellular component |
| mRNA processing | Hs | biological process |
| RNA splicing | Hs | biological process |
| nuclear speck | Hs | cellular component |
| intracellular ribonucleoprotein complex | Hs | cellular component |
| U1 snRNA binding | Hs | molecular function |
| regulation of ATPase activity | Hs | biological process |
| regulation of RNA splicing | Hs | biological process |
| positive regulation of mRNA splicing, via spliceosome | Hs | biological process |
| U2-type prespliceosome | Hs | cellular component |
| precatalytic spliceosome | Hs | cellular component |
| cellular response to retinoic acid | Hs | biological process |
| cellular response to tumor necrosis factor | Hs | biological process |
| cellular response to transforming growth factor beta stimulus | Hs | biological process |
| U1 snRNP binding | Hs | molecular function |
GO (Blast)
22 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| commitment complex | Hs | cellular component | 195 | 8.15e-58 |
| nucleic acid binding | Hs | molecular function | 195 | 8.15e-58 |
| RNA binding | Hs | molecular function | 195 | 8.15e-58 |
| mRNA binding | Hs | molecular function | 195 | 8.15e-58 |
| peptidyl-prolyl cis-trans isomerase activity | Hs | molecular function | 57.0 | 9.71e-09 |
| protein binding | Hs | molecular function | 195 | 8.15e-58 |
| nucleus | Hs | cellular component | 195 | 8.15e-58 |
| nucleoplasm | Hs | cellular component | 195 | 8.15e-58 |
| spliceosomal complex | Hs | cellular component | 195 | 8.15e-58 |
| U1 snRNP | Hs | cellular component | 195 | 8.15e-58 |
| U12-type spliceosomal complex | Hs | cellular component | 93.6 | 1.17e-21 |
| nucleolus | Hs | cellular component | 93.6 | 1.17e-21 |
| cytoplasm | Hs | cellular component | 195 | 8.15e-58 |
| cytosol | Hs | cellular component | 57.0 | 9.71e-09 |
| nuclear speck | Hs | cellular component | 195 | 8.15e-58 |
| isomerase activity | Hs | molecular function | 57.0 | 9.71e-09 |
| snRNA binding | Hs | molecular function | 93.6 | 1.17e-21 |
| intracellular ribonucleoprotein complex | Hs | cellular component | 195 | 8.15e-58 |
| U1 snRNA binding | Hs | molecular function | 195 | 8.15e-58 |
| U2-type prespliceosome | Hs | cellular component | 195 | 8.15e-58 |
| precatalytic spliceosome | Hs | cellular component | 195 | 8.15e-58 |
| U1 snRNP binding | Hs | molecular function | 195 | 8.15e-58 |
GO (InterProScan)
2 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| nucleic acid binding | SUPERFAMILY | molecular function | 6.52E-22 |
| U1 snRNA binding | CDD | molecular function | 1.40649E-50 |
