Aniseed - Gene card

Gene 'Moocci.CG.ELv1_2.S54...'

Gene Card

Best human hits

RPS27; RPS27L

Species

M.occidentalis

Unique Gene ID

Moocci.g00021023

Gene Model ID

Moocci.CG.ELv1_2.S544896.g21023

Location

S544896:8153..11772

Transcript Models and Sequences

Moocci.CG.ELv1_2.S544896.g21023.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term	Analysis	Definition
Ribosomal_S27e	ProDom	Ribosomal protein S27e
Ribosomal_S27e	Pfam	Ribosomal protein S27e
Ribosomal_S27e	Hamap	Ribosomal protein S27e
Ribosomal_S27e	ProSitePatterns	Ribosomal protein S27e
Ribosomal_zn-bd	SUPERFAMILY	Zinc-binding ribosomal protein
Ribosomal_S27e	PANTHER	Ribosomal protein S27e

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

21 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
ribosomal small subunit assembly	Hs	biological process
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	Hs	biological process
DNA binding	Hs	molecular function
RNA binding	Hs	molecular function
structural constituent of ribosome	Hs	molecular function
protein binding	Hs	molecular function
intracellular	Hs	cellular component
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
cytosol	Hs	cellular component
ribosome	Hs	cellular component
rRNA processing	Hs	biological process
translation	Hs	biological process
translational initiation	Hs	biological process
SRP-dependent cotranslational protein targeting to membrane	Hs	biological process
sister chromatid cohesion	Hs	biological process
zinc ion binding	Hs	molecular function
cell proliferation	Hs	biological process
cytosolic small ribosomal subunit	Hs	cellular component
intracellular ribonucleoprotein complex	Hs	cellular component
metal ion binding	Hs	molecular function

GO (Blast)

15 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
DNA binding	Hs	molecular function	121	2.19e-37
RNA binding	Hs	molecular function	121	2.19e-37
structural constituent of ribosome	Hs	molecular function	121	2.19e-37
protein binding	Hs	molecular function	121	2.19e-37
intracellular	Hs	cellular component	121	2.19e-37
nucleus	Hs	cellular component	121	2.19e-37
nucleoplasm	Hs	cellular component	121	2.19e-37
cytosol	Hs	cellular component	121	2.19e-37
ribosome	Hs	cellular component	121	2.19e-37
zinc ion binding	Hs	molecular function	121	2.19e-37
translation activator activity	Hs	molecular function	120	7.53e-37
cysteine-type endopeptidase activator activity involved in apoptotic process	Hs	molecular function	120	7.53e-37
cytosolic small ribosomal subunit	Hs	cellular component	121	2.19e-37
intracellular ribonucleoprotein complex	Hs	cellular component	121	2.19e-37
metal ion binding	Hs	molecular function	121	2.19e-37

GO (InterProScan)

4 results

GO Term	Analysis	Type	e-value
structural constituent of ribosome	PANTHER	molecular function	2.5E-48
intracellular	PANTHER	cellular component	2.5E-48
ribosome	PANTHER	cellular component	2.5E-48
translation	PANTHER	biological process	2.5E-48