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GENE CARD

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Gene Card

Best human hits

POLR2H

Species

M.occidentalis

Unique Gene ID

Moocci.g00026368

Gene Model ID

Moocci.CG.ELv1_2.S620802.g26368

Location

S620802:26173..28392

Transcript Models and Sequences

  Moocci.CG.ELv1_2.S620802.g26368.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
RNA_pol_Rpb8 PANTHER RNA polymerase, Rpb8
RNA_pol_Rpb8 Pfam RNA polymerase, Rpb8
NA-bd_OB-fold SUPERFAMILY Nucleic acid-binding, OB-fold
RNA_pol_Rpb8 PIRSF RNA polymerase, Rpb8
RNA_pol_Rpb8 SMART RNA polymerase, Rpb8

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

30 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
mRNA splicing, via spliceosome Hs biological process
RNA polymerase I activity Hs molecular function
RNA polymerase II activity Hs molecular function
RNA polymerase III activity Hs molecular function
DNA binding Hs molecular function
single-stranded DNA binding Hs molecular function
DNA-directed 5'-3' RNA polymerase activity Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
DNA-directed RNA polymerase II, core complex Hs cellular component
DNA-directed RNA polymerase III complex Hs cellular component
nucleolus Hs cellular component
DNA-directed RNA polymerase I complex Hs cellular component
cytosol Hs cellular component
transcription-coupled nucleotide-excision repair Hs biological process
transcription, DNA-templated Hs biological process
termination of RNA polymerase I transcription Hs biological process
transcription from RNA polymerase II promoter Hs biological process
transcription initiation from RNA polymerase II promoter Hs biological process
transcription elongation from RNA polymerase II promoter Hs biological process
7-methylguanosine mRNA capping Hs biological process
transcription from RNA polymerase III promoter Hs biological process
fibroblast growth factor receptor signaling pathway Hs biological process
RNA metabolic process Hs biological process
positive regulation of type I interferon production Hs biological process
protein-DNA complex Hs cellular component
somatic stem cell population maintenance Hs biological process
snRNA transcription from RNA polymerase II promoter Hs biological process
positive regulation of gene expression, epigenetic Hs biological process
regulation of gene silencing by miRNA Hs biological process

GO (Blast)

14 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
RNA polymerase I activity Hs molecular function 181 2.07e-59
RNA polymerase II activity Hs molecular function 181 2.07e-59
RNA polymerase III activity Hs molecular function 181 2.07e-59
DNA binding Hs molecular function 181 2.07e-59
single-stranded DNA binding Hs molecular function 181 2.07e-59
DNA-directed 5'-3' RNA polymerase activity Hs molecular function 181 2.07e-59
nucleus Hs cellular component 181 2.07e-59
nucleoplasm Hs cellular component 181 2.07e-59
DNA-directed RNA polymerase II, core complex Hs cellular component 181 2.07e-59
DNA-directed RNA polymerase III complex Hs cellular component 181 2.07e-59
nucleolus Hs cellular component 181 2.07e-59
DNA-directed RNA polymerase I complex Hs cellular component 181 2.07e-59
cytosol Hs cellular component 181 2.07e-59
protein-DNA complex Hs cellular component 181 2.07e-59

GO (InterProScan)

1 result

GO Term Analysis Type e-value
transcription, DNA-templated SMART biological process 1.1E-73

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