Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

SMC1A; SMC2; SMC4

Species

M.oculata

Unique Gene ID

Moocul.g00007315

Gene Model ID

Moocul.CG.ELv1_2.S91989.g07315

Location

S91989:52392..56613

Transcript Models and Sequences

  Moocul.CG.ELv1_2.S91989.g07315.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree
 Click here to see the tree inference method

Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
SMC_hinge_sf SUPERFAMILY SMCs flexible hinge superfamily
RecF/RecN/SMC_N Pfam RecF/RecN/SMC, N-terminal
SMC_hinge SMART SMCs flexible hinge
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase
SMC_hinge Pfam SMCs flexible hinge
SMC PIRSF Structural maintenance of chromosomes protein

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

20 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
mitotic sister chromatid segregation Hs biological process
nucleotide binding Hs molecular function
condensin complex Hs cellular component
protein binding Hs molecular function
ATP binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
chromosome Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
cell cycle Hs biological process
mitotic chromosome condensation Hs biological process
meiotic chromosome condensation Hs biological process
nuclear speck Hs cellular component
chromosome condensation Hs biological process
meiotic chromosome segregation Hs biological process
protein heterodimerization activity Hs molecular function
chromosome organization Hs biological process
cell division Hs biological process
kinetochore organization Hs biological process

GO (Blast)

27 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
nucleotide binding Hs molecular function 1037 0.0
nuclear chromosome Hs cellular component 170 1.06e-42
chromosome, centromeric region Hs cellular component 160 1.20e-39
kinetochore Hs cellular component 160 1.20e-39
condensed chromosome kinetochore Hs cellular component 160 1.20e-39
condensed chromosome Hs cellular component 170 1.06e-42
condensed nuclear chromosome Hs cellular component 160 1.20e-39
condensin complex Hs cellular component 1037 0.0
chromatin binding Hs molecular function 160 1.20e-39
RNA binding Hs molecular function 160 1.20e-39
protein binding Hs molecular function 1037 0.0
ATP binding Hs molecular function 1037 0.0
nucleus Hs cellular component 1037 0.0
nucleoplasm Hs cellular component 1037 0.0
chromosome Hs cellular component 1037 0.0
nucleolus Hs cellular component 170 1.06e-42
cytoplasm Hs cellular component 1037 0.0
cytosol Hs cellular component 1037 0.0
cohesin complex Hs cellular component 160 1.20e-39
nuclear matrix Hs cellular component 160 1.20e-39
nuclear speck Hs cellular component 1037 0.0
meiotic cohesin complex Hs cellular component 160 1.20e-39
mediator complex binding Hs molecular function 160 1.20e-39
macromolecular complex binding Hs molecular function 160 1.20e-39
protein heterodimerization activity Hs molecular function 1037 0.0
extracellular exosome Hs cellular component 170 1.06e-42
mitotic spindle pole Hs cellular component 160 1.20e-39

GO (InterProScan)

4 results

GO Term Analysis Type e-value
protein binding SUPERFAMILY molecular function 1.23E-49
ATP binding SUPERFAMILY molecular function 1.23E-49
chromosome SUPERFAMILY cellular component 1.23E-49
chromosome organization SUPERFAMILY biological process 1.23E-49

Back to Top