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GENE CARD

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Gene Card

Best human hits

MACF1; SYNE1; SYNE2

Species

M.oculata

Unique Gene ID

Moocul.g00012878

Gene Model ID

Moocul.CG.ELv1_2.S113418.g12878

Location

S113418:103369..107289

Transcript Models and Sequences

  Moocul.CG.ELv1_2.S113418.g12878.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

2 results

IPR Term Analysis Definition
Spectrin/alpha-actinin SMART Spectrin/alpha-actinin
SYNE1 PANTHER Nesprin-1

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

46 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
P-body Hs cellular component 263 5.29e-75
RNA binding Hs molecular function 263 5.29e-75
actin binding Hs molecular function 263 5.29e-75
calcium ion binding Hs molecular function 55.5 1.01e-07
protein binding Hs molecular function 263 5.29e-75
lamin binding Hs molecular function 263 5.29e-75
nucleus Hs cellular component 263 5.29e-75
nuclear envelope Hs cellular component 263 5.29e-75
nuclear outer membrane Hs cellular component 263 5.29e-75
nucleoplasm Hs cellular component 263 5.29e-75
nucleolus Hs cellular component 263 5.29e-75
cytoplasm Hs cellular component 263 5.29e-75
mitochondrion Hs cellular component 73.9 2.64e-13
Golgi apparatus Hs cellular component 263 5.29e-75
cytoskeleton Hs cellular component 263 5.29e-75
microtubule Hs cellular component 55.5 1.01e-07
plasma membrane Hs cellular component 73.9 2.64e-13
focal adhesion Hs cellular component 73.9 2.64e-13
microtubule binding Hs molecular function 55.5 1.01e-07
actin cytoskeleton Hs cellular component 55.5 1.01e-07
membrane Hs cellular component 263 5.29e-75
integral component of membrane Hs cellular component 263 5.29e-75
aggresome Hs cellular component 73.9 2.64e-13
sarcoplasmic reticulum Hs cellular component 73.9 2.64e-13
ATPase activity Hs molecular function 55.5 1.01e-07
enzyme binding Hs molecular function 263 5.29e-75
myofibril Hs cellular component 73.9 2.64e-13
sarcomere Hs cellular component 263 5.29e-75
Z disc Hs cellular component 73.9 2.64e-13
cell junction Hs cellular component 73.9 2.64e-13
lamellipodium membrane Hs cellular component 73.9 2.64e-13
filopodium membrane Hs cellular component 73.9 2.64e-13
nuclear membrane Hs cellular component 263 5.29e-75
nuclear lumen Hs cellular component 73.9 2.64e-13
ruffle membrane Hs cellular component 55.5 1.01e-07
sarcoplasmic reticulum membrane Hs cellular component 73.9 2.64e-13
LINC complex Hs cellular component 263 5.29e-75
protein homodimerization activity Hs molecular function 263 5.29e-75
cell projection Hs cellular component 55.5 1.01e-07
intermediate filament cytoskeleton Hs cellular component 73.9 2.64e-13
postsynaptic membrane Hs cellular component 263 5.29e-75
cadherin binding Hs molecular function 55.5 1.01e-07
metal ion binding Hs molecular function 55.5 1.01e-07
microtubule minus-end binding Hs molecular function 55.5 1.01e-07
actin filament binding Hs molecular function 263 5.29e-75
extracellular exosome Hs cellular component 73.9 2.64e-13

GO (InterProScan)

4 results

GO Term Analysis Type e-value
nuclear envelope PANTHER cellular component 1.1E-115
LINC complex PANTHER cellular component 1.1E-115
actin filament binding PANTHER molecular function 1.1E-115
cytoskeletal anchoring at nuclear membrane PANTHER biological process 1.1E-115