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GENE CARD

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Gene Card

Best human hits

HNF4A; HNF4G; RXRA

Species

M.oculata

Unique Gene ID

Moocul.g00013797

Gene Model ID

Moocul.CG.ELv1_2.S114935.g13797

Location

S114935:7789..10056

Transcript Models and Sequences

  Moocul.CG.ELv1_2.S114935.g13797.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
Znf_hrmn_rcpt ProSiteProfiles Zinc finger, nuclear hormone receptor-type
Znf_NHR/GATA Gene3D Zinc finger, NHR/GATA-type
Znf_hrmn_rcpt Pfam Zinc finger, nuclear hormone receptor-type
Znf_hrmn_rcpt SMART Zinc finger, nuclear hormone receptor-type
Znf_hrmn_rcpt ProSitePatterns Zinc finger, nuclear hormone receptor-type
Znf_hrmn_rcpt PRINTS Zinc finger, nuclear hormone receptor-type

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

42 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nuclear chromatin Hs cellular component 125 9.75e-34
RNA polymerase II regulatory region sequence-specific DNA binding Hs molecular function 125 9.75e-34
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 187 8.44e-57
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 187 8.44e-57
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 187 8.44e-57
RNA polymerase II activating transcription factor binding Hs molecular function 187 8.44e-57
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding Hs molecular function 187 8.44e-57
retinoic acid binding Hs molecular function 125 9.75e-34
DNA binding Hs molecular function 187 8.44e-57
double-stranded DNA binding Hs molecular function 125 9.75e-34
transcription factor activity, sequence-specific DNA binding Hs molecular function 187 8.44e-57
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding Hs molecular function 187 8.44e-57
steroid hormone receptor activity Hs molecular function 187 8.44e-57
retinoic acid receptor activity Hs molecular function 125 9.75e-34
transcription coactivator activity Hs molecular function 125 9.75e-34
nuclear receptor activity Hs molecular function 187 8.44e-57
9-cis retinoic acid receptor activity Hs molecular function 125 9.75e-34
receptor binding Hs molecular function 187 8.44e-57
fatty acid binding Hs molecular function 187 8.44e-57
protein binding Hs molecular function 187 8.44e-57
nucleus Hs cellular component 187 8.44e-57
nucleoplasm Hs cellular component 187 8.44e-57
cytoplasm Hs cellular component 187 8.44e-57
transcription factor binding Hs molecular function 125 9.75e-34
zinc ion binding Hs molecular function 187 8.44e-57
ligand-dependent nuclear receptor binding Hs molecular function 125 9.75e-34
enzyme binding Hs molecular function 125 9.75e-34
chromatin DNA binding Hs molecular function 125 9.75e-34
macromolecular complex Hs cellular component 125 9.75e-34
peptide binding Hs molecular function 125 9.75e-34
protein homodimerization activity Hs molecular function 187 8.44e-57
vitamin D receptor binding Hs molecular function 125 9.75e-34
receptor complex Hs cellular component 125 9.75e-34
sequence-specific DNA binding Hs molecular function 187 8.44e-57
transcription regulatory region DNA binding Hs molecular function 187 8.44e-57
retinoic acid-responsive element binding Hs molecular function 125 9.75e-34
metal ion binding Hs molecular function 187 8.44e-57
protein heterodimerization activity Hs molecular function 125 9.75e-34
DBD domain binding Hs molecular function 125 9.75e-34
LBD domain binding Hs molecular function 125 9.75e-34
vitamin D response element binding Hs molecular function 125 9.75e-34
RNA polymerase II transcription factor complex Hs cellular component 125 9.75e-34

GO (InterProScan)

5 results

GO Term Analysis Type e-value
transcription factor activity, sequence-specific DNA binding SMART molecular function 4.2E-38
nucleus SMART cellular component 4.2E-38
regulation of transcription, DNA-templated SMART biological process 4.2E-38
zinc ion binding SMART molecular function 4.2E-38
sequence-specific DNA binding SMART molecular function 4.2E-38