Gene Card
Best human hits
SRSF4; SRSF5; SRSF6
Species
Unique Gene ID
Phfumi.g00006474
Gene Model ID
Phfumi.CG.MTP2014.S4624.g06474
Location
S4624:6824..7646
Transcript Models and Sequences
n/a
You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see how you can interact with this tree
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
6 results
| IPR Term | Analysis | Definition |
|---|---|---|
| RBD_domain_sf | SUPERFAMILY | RNA-binding domain superfamily |
| RRM_dom | ProSiteProfiles | RNA recognition motif domain |
| RRM_dom | Pfam | RNA recognition motif domain |
| Nucleotide-bd_a/b_plait_sf | Gene3D | Nucleotide-binding alpha-beta plait domain superfamily |
| RRM_dom | SMART | RNA recognition motif domain |
| RRM1_SRSF4-like | CDD | Serine/arginine-rich splicing factor SRSF4-like, RNA recognition motif 1 |
GOSlim
9 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| nucleic acid binding | Blast | molecular function |
| RNA binding | Blast | molecular function |
| protein binding | Blast | molecular function |
| nucleus | Blast | cellular component |
| nucleoplasm | Blast | cellular component |
| nucleolus | Blast | cellular component |
| cytosol | Blast | cellular component |
| nuclear speck | Blast | cellular component |
| protein kinase binding | Blast | molecular function |
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|
GO (Blast)
11 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| nucleic acid binding | Hs | molecular function | 222 | 1.45e-69 |
| RNA binding | Hs | molecular function | 222 | 1.45e-69 |
| protein binding | Hs | molecular function | 222 | 1.45e-69 |
| nucleus | Hs | cellular component | 222 | 1.45e-69 |
| nucleoplasm | Hs | cellular component | 222 | 1.45e-69 |
| nucleolus | Hs | cellular component | 183 | 7.93e-57 |
| cytosol | Hs | cellular component | 183 | 7.93e-57 |
| nuclear speck | Hs | cellular component | 222 | 1.45e-69 |
| pre-mRNA binding | Hs | molecular function | 194 | 3.01e-60 |
| protein kinase B binding | Hs | molecular function | 183 | 7.93e-57 |
| sequence-specific mRNA binding | Hs | molecular function | 222 | 1.45e-69 |
GO (InterProScan)
1 result
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| nucleic acid binding | SUPERFAMILY | molecular function | 2.19E-34 |
