Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

NOTCH2; SLIT3; SVEP1

Species

P.fumigata

Unique Gene ID

Phfumi.g00009153

Gene Model ID

Phfumi.CG.MTP2014.S13850.g09153

Location

S13850:1..1270

Transcript Models and Sequences

  Phfumi.CG.MTP2014.S13850.g09153.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

No Phylogeny Tree for this Gene.
Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
EGF-like_CS ProSitePatterns EGF-like, conserved site
EGF-like_dom ProSiteProfiles EGF-like domain
EGF_Ca-bd_CS ProSitePatterns EGF-like calcium-binding, conserved site

GOSlim

18 results

GO Term Annotation Origin Type
Golgi membrane Blast cellular component
chromatin binding Blast molecular function
calcium ion binding Blast molecular function
protein binding Blast molecular function
extracellular region Blast cellular component
extracellular space Blast cellular component
nucleus Blast cellular component
nucleoplasm Blast cellular component
cytoplasm Blast cellular component
mitochondrion Blast cellular component
endoplasmic reticulum membrane Blast cellular component
plasma membrane Blast cellular component
integral component of plasma membrane Blast cellular component
cell surface Blast cellular component
membrane Blast cellular component
integral component of membrane Blast cellular component
macromolecular complex Blast cellular component
receptor binding Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

20 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
Golgi membrane Hs cellular component 60.5 5.31e-12
chromatin binding Hs molecular function 57.0 9.70e-11
receptor activity Hs molecular function 60.5 5.31e-12
calcium ion binding Hs molecular function 62.0 1.63e-12
protein binding Hs molecular function 62.0 1.63e-12
extracellular region Hs cellular component 62.0 1.63e-12
extracellular space Hs cellular component 62.0 1.63e-12
nucleus Hs cellular component 60.5 5.31e-12
nucleoplasm Hs cellular component 60.5 5.31e-12
cytoplasm Hs cellular component 60.5 5.31e-12
mitochondrion Hs cellular component 62.0 1.63e-12
endoplasmic reticulum membrane Hs cellular component 60.5 5.31e-12
plasma membrane Hs cellular component 60.5 5.31e-12
integral component of plasma membrane Hs cellular component 60.5 5.31e-12
cell surface Hs cellular component 60.5 5.31e-12
membrane Hs cellular component 60.5 5.31e-12
integral component of membrane Hs cellular component 60.5 5.31e-12
transcription factor activity, ligand-activated RNA polymerase II transcription factor binding Hs molecular function 60.5 5.31e-12
receptor complex Hs cellular component 60.5 5.31e-12
Roundabout binding Hs molecular function 62.0 1.63e-12

GO (InterProScan)

1 result

GO Term Analysis Type e-value
calcium ion binding ProSitePatterns molecular function