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GENE CARD

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Gene Card

Best human hits

BCO1; BCO2; RPE65

Species

P.mammillata

Unique Gene ID

Phmamm.g00000028

Gene Model ID

Phmamm.CG.MTP2014.S1.g00028

Location

S1:337975..343300

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S1.g00028.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

12 results

AHC0AAA1YF16

Plate: Plate_1_F16

AHC0AAA5YG07

Plate: Plate_5_G07

AHC0AAA34YN07

Plate: Plate_34_N07

AHC0AAA47YJ20

Plate: Plate_47_J20

AHC0AAA73YG01

Plate: Plate_73_G01

AHC0AAA86YM21

Plate: Plate_86_M21

AHC0AAA97YC13

Plate: Plate_97_C13

AHC0AAA167YP14

Plate: Plate_167_P14

AHC0AAA169YJ16

Plate: Plate_169_J16

AHC0AAA189YF18

Plate: Plate_189_F18

AHC0AAA201YA17

Plate: Plate_201_A17

AHC0AAA233YP09

Plate: Plate_233_P09

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

2 results

IPR Term Analysis Definition
Carotenoid_Oase PANTHER Carotenoid oxygenase
Carotenoid_Oase Pfam Carotenoid oxygenase

GOSlim

19 results

GO Term Annotation Origin Type
intracellular Blast cellular component
cytoplasm Blast cellular component
mitochondrion Blast cellular component
mitochondrial matrix Blast cellular component
endoplasmic reticulum Blast cellular component
cytosol Orthology cellular component
plasma membrane Blast cellular component
membrane Blast cellular component
hydrolase activity Blast molecular function
organelle membrane Blast cellular component
intracellular membrane-bounded organelle Blast cellular component
cell body Blast cellular component
metal ion binding Orthology molecular function
oxidation-reduction process Orthology biological process
cellular metabolic process Orthology biological process
organic substance metabolic process Orthology biological process
catalytic activity Orthology molecular function
anion binding Blast molecular function
cation binding Blast molecular function

GO (Orthology)

10 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
retinoid metabolic process Hs biological process
beta-carotene 15,15'-monooxygenase activity Hs molecular function
cytosol Hs cellular component
oxidoreductase activity Hs molecular function
oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen Hs molecular function
retinol metabolic process Hs biological process
retinal metabolic process Hs biological process
metal ion binding Hs molecular function
dioxygenase activity Hs molecular function
oxidation-reduction process Hs biological process

GO (Blast)

25 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
phosphatidylserine binding Hs molecular function 129 1.82e-33
beta-carotene 15,15'-monooxygenase activity Hs molecular function 177 1.12e-50
retinal isomerase activity Hs molecular function 129 1.82e-33
intracellular Hs cellular component 137 3.01e-36
cytoplasm Hs cellular component 129 1.82e-33
mitochondrion Hs cellular component 137 3.01e-36
mitochondrial matrix Hs cellular component 137 3.01e-36
endoplasmic reticulum Hs cellular component 129 1.82e-33
cytosol Hs cellular component 177 1.12e-50
plasma membrane Hs cellular component 129 1.82e-33
membrane Hs cellular component 129 1.82e-33
oxidoreductase activity Hs molecular function 177 1.12e-50
oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen Hs molecular function 177 1.12e-50
hydrolase activity Hs molecular function 129 1.82e-33
isomerase activity Hs molecular function 129 1.82e-33
organelle membrane Hs cellular component 129 1.82e-33
phosphatidylcholine binding Hs molecular function 129 1.82e-33
intracellular membrane-bounded organelle Hs cellular component 129 1.82e-33
cell body Hs cellular component 129 1.82e-33
metal ion binding Hs molecular function 177 1.12e-50
dioxygenase activity Hs molecular function 177 1.12e-50
all-trans-retinyl-palmitate hydrolase, 11-cis retinol forming activity Hs molecular function 129 1.82e-33
all-trans-retinyl-ester hydrolase, 11-cis retinol forming activity Hs molecular function 129 1.82e-33
beta,beta-carotene-9',10'-cleaving oxygenase activity Hs molecular function 137 3.01e-36
cardiolipin binding Hs molecular function 129 1.82e-33

GO (InterProScan)

2 results

GO Term Analysis Type e-value
oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen PANTHER molecular function 8.5E-79
oxidation-reduction process PANTHER biological process 8.5E-79