Gene Card
Best human hits
NHP2; RPL7A; SNU13
Species
Unique Gene ID
Phmamm.g00000055
Gene Model ID
Phmamm.CG.MTP2014.S1.g00055
Location
S1:589203..591113
Transcript Models and Sequences
Phmamm.CG.MTP2014.S1.g00055.01.t
Phmamm.CG.MTP2014.S1.g00055.02.t
n/a
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You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
6 results
| IPR Term | Analysis | Definition |
|---|---|---|
| L30e-like | Gene3D | 50S ribosomal protein L30e-like |
| Ribosomal_L7Ae/L8/Nhp2 | PRINTS | Ribosomal protein L7Ae/L8/Nhp2 family |
| Ribosomal_L7Ae/L30e/S12e/Gad45 | Pfam | Ribosomal protein L7Ae/L30e/S12e/Gadd45 |
| Ribosomal_L7Ae_CS | ProSitePatterns | Ribosomal protein L7Ae conserved site |
| L30e-like | SUPERFAMILY | 50S ribosomal protein L30e-like |
| H/ACA_rnp_Nhp2_euk | PRINTS | H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote |
GOSlim
25 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| mRNA splicing, via spliceosome | Orthology | biological process |
| RNA binding | Orthology | molecular function |
| structural constituent of ribosome | Blast | molecular function |
| protein binding | Orthology | molecular function |
| nucleus | Orthology | cellular component |
| nucleoplasm | Orthology | cellular component |
| nucleolus | Orthology | cellular component |
| cytoplasm | Blast | cellular component |
| cytosol | Blast | cellular component |
| ribosome | Blast | cellular component |
| focal adhesion | Blast | cellular component |
| mRNA processing | Orthology | biological process |
| RNA splicing | Orthology | biological process |
| membrane | Blast | cellular component |
| macromolecular complex | Orthology | cellular component |
| extracellular exosome | Blast | cellular component |
| RNA processing | Orthology | biological process |
| nuclear part | Orthology | cellular component |
| sexual reproduction | Orthology | biological process |
| enzyme binding | Orthology | molecular function |
| intracellular non-membrane-bounded organelle | Blast | cellular component |
| nuclear lumen | Blast | cellular component |
| nuclear body | Blast | cellular component |
| intracellular organelle part | Blast | cellular component |
| cell adhesion molecule binding | Blast | molecular function |
GO (Orthology)
30 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| mRNA splicing, via spliceosome | Hs | biological process |
| maturation of LSU-rRNA | Hs | biological process |
| box C/D snoRNP assembly | Hs | biological process |
| dense fibrillar component | Hs | cellular component |
| RNA binding | Hs | molecular function |
| protein binding | Hs | molecular function |
| nucleus | Hs | cellular component |
| nucleoplasm | Hs | cellular component |
| spliceosomal complex | Hs | cellular component |
| U4atac snRNP | Hs | cellular component |
| nucleolus | Hs | cellular component |
| rRNA processing | Hs | biological process |
| mRNA processing | Hs | biological process |
| single fertilization | Hs | biological process |
| RNA splicing | Hs | biological process |
| maturation of SSU-rRNA | Hs | biological process |
| snoRNA binding | Hs | molecular function |
| intracellular ribonucleoprotein complex | Hs | cellular component |
| U4 snRNA binding | Hs | molecular function |
| U4atac snRNA binding | Hs | molecular function |
| box C/D snoRNP complex | Hs | cellular component |
| small-subunit processome | Hs | cellular component |
| macromolecular complex | Hs | cellular component |
| U3 snoRNA binding | Hs | molecular function |
| box C/D snoRNA binding | Hs | molecular function |
| ribosome biogenesis | Hs | biological process |
| U4/U6 x U5 tri-snRNP complex | Hs | cellular component |
| ATPase binding | Hs | molecular function |
| U2-type precatalytic spliceosome | Hs | cellular component |
| precatalytic spliceosome | Hs | cellular component |
GO (Blast)
40 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| nuclear chromosome, telomeric region | Hs | cellular component | 98.2 | 2.71e-27 |
| dense fibrillar component | Hs | cellular component | 197 | 1.33e-66 |
| RNA binding | Hs | molecular function | 197 | 1.33e-66 |
| structural constituent of ribosome | Hs | molecular function | 50.1 | 3.55e-08 |
| protein binding | Hs | molecular function | 197 | 1.33e-66 |
| nucleus | Hs | cellular component | 197 | 1.33e-66 |
| nucleoplasm | Hs | cellular component | 197 | 1.33e-66 |
| spliceosomal complex | Hs | cellular component | 197 | 1.33e-66 |
| U4atac snRNP | Hs | cellular component | 197 | 1.33e-66 |
| telomerase holoenzyme complex | Hs | cellular component | 98.2 | 2.71e-27 |
| nucleolus | Hs | cellular component | 197 | 1.33e-66 |
| small nucleolar ribonucleoprotein complex | Hs | cellular component | 98.2 | 2.71e-27 |
| cytoplasm | Hs | cellular component | 50.1 | 3.55e-08 |
| cytosol | Hs | cellular component | 50.1 | 3.55e-08 |
| ribosome | Hs | cellular component | 50.1 | 3.55e-08 |
| focal adhesion | Hs | cellular component | 50.1 | 3.55e-08 |
| Cajal body | Hs | cellular component | 98.2 | 2.71e-27 |
| membrane | Hs | cellular component | 50.1 | 3.55e-08 |
| cytosolic large ribosomal subunit | Hs | cellular component | 50.1 | 3.55e-08 |
| snoRNA binding | Hs | molecular function | 197 | 1.33e-66 |
| intracellular ribonucleoprotein complex | Hs | cellular component | 197 | 1.33e-66 |
| U4 snRNA binding | Hs | molecular function | 197 | 1.33e-66 |
| U4atac snRNA binding | Hs | molecular function | 197 | 1.33e-66 |
| box C/D snoRNP complex | Hs | cellular component | 197 | 1.33e-66 |
| box H/ACA snoRNP complex | Hs | cellular component | 98.2 | 2.71e-27 |
| small-subunit processome | Hs | cellular component | 197 | 1.33e-66 |
| macromolecular complex | Hs | cellular component | 197 | 1.33e-66 |
| U3 snoRNA binding | Hs | molecular function | 197 | 1.33e-66 |
| box C/D snoRNA binding | Hs | molecular function | 197 | 1.33e-66 |
| box H/ACA snoRNA binding | Hs | molecular function | 98.2 | 2.71e-27 |
| polysomal ribosome | Hs | cellular component | 50.1 | 3.55e-08 |
| cadherin binding | Hs | molecular function | 50.1 | 3.55e-08 |
| U4/U6 x U5 tri-snRNP complex | Hs | cellular component | 197 | 1.33e-66 |
| ATPase binding | Hs | molecular function | 197 | 1.33e-66 |
| telomerase RNA binding | Hs | molecular function | 98.2 | 2.71e-27 |
| extracellular exosome | Hs | cellular component | 50.1 | 3.55e-08 |
| U2-type precatalytic spliceosome | Hs | cellular component | 197 | 1.33e-66 |
| precatalytic spliceosome | Hs | cellular component | 197 | 1.33e-66 |
| box H/ACA scaRNP complex | Hs | cellular component | 98.2 | 2.71e-27 |
| box H/ACA telomerase RNP complex | Hs | cellular component | 98.2 | 2.71e-27 |
GO (InterProScan)
3 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| RNA binding | PRINTS | molecular function | 2.9E-26 |
| nucleolus | PRINTS | cellular component | 2.9E-26 |
| ribosome biogenesis | ProSitePatterns | biological process |
