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GENE CARD

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Gene Card

Best human hits

PKD1; PKD1L2; PKD1L3

Species

P.mammillata

Unique Gene ID

Phmamm.g00000065

Gene Model ID

Phmamm.CG.MTP2014.S2.g00065

Location

S2:7138..27355

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S2.g00065.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
PKD1_2_channel Pfam Polycystin cation channel, PKD1/PKD2
PLAT/LH2_dom ProSiteProfiles PLAT/LH2 domain
PLAT/LH2_dom SMART PLAT/LH2 domain
PLAT/LH2_dom_sf SUPERFAMILY PLAT/LH2 domain superfamily
GPS ProSiteProfiles GPS motif
PLAT/LH2_dom Pfam PLAT/LH2 domain

GOSlim

30 results

GO Term Annotation Origin Type
Golgi membrane Blast cellular component
calcium ion binding Blast molecular function
protein binding Blast molecular function
nucleus Blast cellular component
cytoplasm Blast cellular component
Golgi apparatus Blast cellular component
plasma membrane Blast cellular component
integral component of plasma membrane Blast cellular component
cation transport Blast biological process
cell surface Blast cellular component
membrane Blast cellular component
integral component of membrane Blast cellular component
basolateral plasma membrane Blast cellular component
protein kinase binding Blast molecular function
cell projection Blast cellular component
extracellular exosome Blast cellular component
macromolecular complex Blast cellular component
transmembrane transport Blast biological process
metal ion transport Blast biological process
organelle Blast cellular component
plasma membrane region Blast cellular component
plasma membrane part Blast cellular component
binding Blast molecular function
intracellular organelle part Blast cellular component
whole membrane Blast cellular component
cytoplasmic vesicle Blast cellular component
bounding membrane of organelle Blast cellular component
sensory perception Blast biological process
transmembrane signaling receptor activity Blast molecular function
cell projection membrane Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

30 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
Golgi membrane Hs cellular component 122 1.28e-27
polycystin complex Hs cellular component 122 1.28e-27
cation channel activity Hs molecular function 179 5.48e-45
calcium channel activity Hs molecular function 179 5.48e-45
calcium ion binding Hs molecular function 168 1.01e-41
protein binding Hs molecular function 179 5.48e-45
nucleus Hs cellular component 122 1.28e-27
cytoplasm Hs cellular component 122 1.28e-27
Golgi apparatus Hs cellular component 122 1.28e-27
plasma membrane Hs cellular component 179 5.48e-45
integral component of plasma membrane Hs cellular component 122 1.28e-27
cilium Hs cellular component 122 1.28e-27
cation transmembrane transporter activity Hs molecular function 179 5.48e-45
cell surface Hs cellular component 179 5.48e-45
membrane Hs cellular component 179 5.48e-45
integral component of membrane Hs cellular component 179 5.48e-45
basolateral plasma membrane Hs cellular component 122 1.28e-27
lateral plasma membrane Hs cellular component 122 1.28e-27
protein kinase binding Hs molecular function 122 1.28e-27
protein domain specific binding Hs molecular function 122 1.28e-27
carbohydrate binding Hs molecular function 179 5.48e-45
Golgi-associated vesicle membrane Hs cellular component 122 1.28e-27
motile cilium Hs cellular component 122 1.28e-27
sour taste receptor activity Hs molecular function 179 5.48e-45
cation channel complex Hs cellular component 179 5.48e-45
cell projection Hs cellular component 122 1.28e-27
receptor complex Hs cellular component 179 5.48e-45
ion channel binding Hs molecular function 122 1.28e-27
ciliary membrane Hs cellular component 122 1.28e-27
extracellular exosome Hs cellular component 179 5.48e-45

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding SUPERFAMILY molecular function 8.43E-24