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Gene Card

Best human hits

COL7A1; FN1; TNR

Species

P.mammillata

Unique Gene ID

Phmamm.g00000067

Gene Model ID

Phmamm.CG.MTP2014.S2.g00067

Location

S2:34295..65453

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S2.g00067.01.t

External Database Gene Card

External database links

No result

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WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

9 results

IPR Term Analysis Definition
FN3_sf SUPERFAMILY Fibronectin type III superfamily
FN3_dom ProSiteProfiles Fibronectin type III
Pan_app Pfam PAN/Apple domain
FN3_dom CDD Fibronectin type III
Ig-like_fold Gene3D Immunoglobulin-like fold
Pan_app ProSiteProfiles PAN/Apple domain
FN3_dom Pfam Fibronectin type III
FN3_dom SMART Fibronectin type III
Pan_app SMART PAN/Apple domain

GOSlim

31 results

GO Term Annotation Origin Type
Golgi membrane Blast cellular component
receptor binding Blast molecular function
integrin binding Blast molecular function
protein binding Blast molecular function
extracellular region Blast cellular component
extracellular space Blast cellular component
endoplasmic reticulum lumen Blast cellular component
protein C-terminus binding Blast molecular function
cell surface Blast cellular component
apical plasma membrane Blast cellular component
enzyme binding Blast molecular function
identical protein binding Blast molecular function
membrane raft Blast cellular component
extracellular exosome Blast cellular component
enzyme regulator activity Blast molecular function
serine-type endopeptidase activity Blast molecular function
macromolecular complex binding Blast molecular function
macromolecular complex Blast cellular component
extracellular region part Blast cellular component
cytoplasmic part Blast cellular component
intracellular membrane-bounded organelle Blast cellular component
anion binding Blast molecular function
carbohydrate derivative binding Blast molecular function
peptidase activity Blast molecular function
positive regulation of hydrolase activity Blast biological process
enzyme activator activity Blast molecular function
cytoplasmic vesicle Blast cellular component
intracellular organelle part Blast cellular component
endomembrane system Blast cellular component
intracellular organelle lumen Blast cellular component
bounding membrane of organelle Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

35 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
Golgi membrane Hs cellular component 83.6 1.06e-15
protease binding Hs molecular function 86.7 1.36e-16
serine-type endopeptidase inhibitor activity Hs molecular function 83.6 1.06e-15
receptor binding Hs molecular function 86.7 1.36e-16
integrin binding Hs molecular function 86.7 1.36e-16
protein binding Hs molecular function 86.7 1.36e-16
collagen binding Hs molecular function 86.7 1.36e-16
extracellular region Hs cellular component 86.7 1.36e-16
fibrinogen complex Hs cellular component 86.7 1.36e-16
proteinaceous extracellular matrix Hs cellular component 86.7 1.36e-16
collagen trimer Hs cellular component 83.6 1.06e-15
collagen type VII trimer Hs cellular component 83.6 1.06e-15
basement membrane Hs cellular component 86.7 1.36e-16
basal lamina Hs cellular component 86.7 1.36e-16
extracellular space Hs cellular component 86.7 1.36e-16
endoplasmic reticulum lumen Hs cellular component 86.7 1.36e-16
endoplasmic reticulum-Golgi intermediate compartment Hs cellular component 86.7 1.36e-16
protein C-terminus binding Hs molecular function 86.7 1.36e-16
heparin binding Hs molecular function 86.7 1.36e-16
cell surface Hs cellular component 86.3 1.31e-16
apical plasma membrane Hs cellular component 86.7 1.36e-16
peptidase activator activity Hs molecular function 86.7 1.36e-16
enzyme binding Hs molecular function 86.7 1.36e-16
COPII-coated ER to Golgi transport vesicle Hs cellular component 83.6 1.06e-15
peptidase inhibitor activity Hs molecular function 83.6 1.06e-15
extracellular matrix Hs cellular component 86.7 1.36e-16
platelet alpha granule lumen Hs cellular component 86.7 1.36e-16
endoplasmic reticulum-Golgi intermediate compartment membrane Hs cellular component 83.6 1.06e-15
identical protein binding Hs molecular function 86.7 1.36e-16
membrane raft Hs cellular component 86.3 1.31e-16
chaperone binding Hs molecular function 86.7 1.36e-16
extracellular exosome Hs cellular component 86.7 1.36e-16
perineuronal net Hs cellular component 86.3 1.31e-16
blood microparticle Hs cellular component 86.7 1.36e-16
disordered domain specific binding Hs molecular function 86.7 1.36e-16

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding SUPERFAMILY molecular function 6.88E-18

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