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GENE CARD

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Gene Card

Best human hits

NVL; SPATA5; VCP

Species

P.mammillata

Unique Gene ID

Phmamm.g00000069

Gene Model ID

Phmamm.CG.MTP2014.S2.g00069

Location

S2:153392..197691

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

6 results

AHC0AAA7YM23

Plate: Plate_7_M23

AHC0AAA134YL09

Plate: Plate_134_L09

AHC0AAA194YA05

Plate: Plate_194_A05

AHC0AAA220YG07

Plate: Plate_220_G07

AHC0AAA231YB13

Plate: Plate_231_B13

AHC0AAA244YD02

Plate: Plate_244_D02

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
ATPase_AAA_core Pfam ATPase, AAA-type, core
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase
ATPase_AAA_CS ProSitePatterns ATPase, AAA-type, conserved site
AAA+_ATPase SMART AAA+ ATPase domain

GOSlim

47 results

GO Term Annotation Origin Type
nucleotide binding Orthology molecular function
RNA binding Blast molecular function
receptor binding Blast molecular function
protein binding Blast molecular function
ATP binding Orthology molecular function
extracellular region Blast cellular component
nucleus Blast cellular component
nucleoplasm Blast cellular component
nucleolus Blast cellular component
cytoplasm Orthology cellular component
mitochondrion Orthology cellular component
endoplasmic reticulum Blast cellular component
endoplasmic reticulum membrane Blast cellular component
cytosol Blast cellular component
multicellular organism development Orthology biological process
spermatogenesis Orthology biological process
brain development Orthology biological process
membrane Blast cellular component
hydrolase activity Blast molecular function
cell differentiation Orthology biological process
ubiquitin protein ligase binding Blast molecular function
macromolecular complex Blast cellular component
identical protein binding Blast molecular function
myelin sheath Blast cellular component
intracellular membrane-bounded organelle Blast cellular component
ubiquitin-like protein ligase binding Blast molecular function
perinuclear region of cytoplasm Blast cellular component
extracellular exosome Blast cellular component
intracellular part Blast cellular component
nuclear part Blast cellular component
intracellular non-membrane-bounded organelle Blast cellular component
binding Blast molecular function
nucleoside-triphosphatase activity Blast molecular function
enzyme binding Blast molecular function
intracellular organelle part Blast cellular component
cytoplasmic vesicle Blast cellular component
endomembrane system Blast cellular component
intracellular organelle lumen Blast cellular component
lysosome Blast cellular component
vacuolar part Blast cellular component
enzyme activator activity Blast molecular function
positive regulation of hydrolase activity Blast biological process
peptidase activity, acting on L-amino acid peptides Blast molecular function
anion binding Blast molecular function
adenyl ribonucleotide binding Blast molecular function
macromolecular complex binding Blast molecular function
cytoplasmic part Blast cellular component

GO (Orthology)

8 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
nucleotide binding Hs molecular function
ATP binding Hs molecular function
cytoplasm Hs cellular component
mitochondrion Hs cellular component
multicellular organism development Hs biological process
spermatogenesis Hs biological process
brain development Hs biological process
cell differentiation Hs biological process

GO (Blast)

47 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 442 1.72e-145
proteasome complex Hs cellular component 367 2.63e-117
RNA binding Hs molecular function 367 2.63e-117
receptor binding Hs molecular function 367 2.63e-117
protein binding Hs molecular function 367 2.63e-117
ATP binding Hs molecular function 442 1.72e-145
extracellular region Hs cellular component 367 2.63e-117
nucleus Hs cellular component 367 2.63e-117
nucleoplasm Hs cellular component 367 2.63e-117
telomerase holoenzyme complex Hs cellular component 340 1.97e-106
nucleolus Hs cellular component 340 1.97e-106
cytoplasm Hs cellular component 442 1.72e-145
mitochondrion Hs cellular component 442 1.72e-145
endoplasmic reticulum Hs cellular component 367 2.63e-117
endoplasmic reticulum membrane Hs cellular component 367 2.63e-117
lipid droplet Hs cellular component 367 2.63e-117
cytosol Hs cellular component 367 2.63e-117
lipid binding Hs molecular function 367 2.63e-117
membrane Hs cellular component 340 1.97e-106
hydrolase activity Hs molecular function 367 2.63e-117
ATPase activity Hs molecular function 367 2.63e-117
protein phosphatase binding Hs molecular function 367 2.63e-117
protein domain specific binding Hs molecular function 367 2.63e-117
polyubiquitin modification-dependent protein binding Hs molecular function 367 2.63e-117
ubiquitin protein ligase binding Hs molecular function 367 2.63e-117
macromolecular complex Hs cellular component 367 2.63e-117
VCP-NPL4-UFD1 AAA ATPase complex Hs cellular component 367 2.63e-117
secretory granule lumen Hs cellular component 367 2.63e-117
azurophil granule lumen Hs cellular component 367 2.63e-117
deubiquitinase activator activity Hs molecular function 367 2.63e-117
site of double-strand break Hs cellular component 367 2.63e-117
K48-linked polyubiquitin modification-dependent protein binding Hs molecular function 367 2.63e-117
Derlin-1 retrotranslocation complex Hs cellular component 367 2.63e-117
MHC class I protein binding Hs molecular function 367 2.63e-117
identical protein binding Hs molecular function 367 2.63e-117
myelin sheath Hs cellular component 367 2.63e-117
intracellular membrane-bounded organelle Hs cellular component 367 2.63e-117
ADP binding Hs molecular function 367 2.63e-117
ubiquitin-like protein ligase binding Hs molecular function 367 2.63e-117
perinuclear region of cytoplasm Hs cellular component 367 2.63e-117
extracellular exosome Hs cellular component 367 2.63e-117
BAT3 complex binding Hs molecular function 367 2.63e-117
ficolin-1-rich granule lumen Hs cellular component 367 2.63e-117
ATPase complex Hs cellular component 367 2.63e-117
preribosome binding Hs molecular function 340 1.97e-106
ubiquitin-specific protease binding Hs molecular function 367 2.63e-117
VCP-NSFL1C complex Hs cellular component 367 2.63e-117

GO (InterProScan)

1 result

GO Term Analysis Type e-value
ATP binding Pfam molecular function 2.2E-43