Gene Card
Best human hits
PGAM5; SNRPA; SNRPB2
Species
Unique Gene ID
Phmamm.g00000789
Gene Model ID
Phmamm.CG.MTP2014.S19.g00789
Location
S19:112380..115801
Transcript Models and Sequences
AHC0AAA10YF10
Plate: Plate_10_F10
AHC0AAA10YF19
Plate: Plate_10_F19
AHC0AAA14YG18
Plate: Plate_14_G18
AHC0AAA18YH11
Plate: Plate_18_H11
AHC0AAA2YH13
Plate: Plate_2_H13
AHC0AAA24YL14
Plate: Plate_24_L14
AHC0AAA3YI05
Plate: Plate_3_I05
AHC0AAA6YJ03
Plate: Plate_6_J03
AHC0AAA33YE03
Plate: Plate_33_E03
AHC0AAA37YC06
Plate: Plate_37_C06
AHC0AAA37YK16
Plate: Plate_37_K16
AHC0AAA50YP06
Plate: Plate_50_P06
AHC0AAA51YJ10
Plate: Plate_51_J10
AHC0AAA51YO14
Plate: Plate_51_O14
AHC0AAA58YK19
Plate: Plate_58_K19
AHC0AAA61YP24
Plate: Plate_61_P24
AHC0AAA67YD21
Plate: Plate_67_D21
AHC0AAA72YH10
Plate: Plate_72_H10
AHC0AAA74YD07
Plate: Plate_74_D07
AHC0AAA74YI14
Plate: Plate_74_I14
AHC0AAA79YB21
Plate: Plate_79_B21
AHC0AAA101YG11
Plate: Plate_101_G11
AHC0AAA102YH05
Plate: Plate_102_H05
AHC0AAA102YH09
Plate: Plate_102_H09
AHC0AAA104YI17
Plate: Plate_104_I17
AHC0AAA107YM24
Plate: Plate_107_M24
AHC0AAA117YN18
Plate: Plate_117_N18
AHC0AAA119YM24
Plate: Plate_119_M24
AHC0AAA124YB05
Plate: Plate_124_B05
AHC0AAA124YJ08
Plate: Plate_124_J08
AHC0AAA127YN07
Plate: Plate_127_N07
AHC0AAA133YE16
Plate: Plate_133_E16
AHC0AAA133YK18
Plate: Plate_133_K18
AHC0AAA133YM05
Plate: Plate_133_M05
AHC0AAA135YC11
Plate: Plate_135_C11
AHC0AAA138YP18
Plate: Plate_138_P18
AHC0AAA140YN03
Plate: Plate_140_N03
AHC0AAA141YD22
Plate: Plate_141_D22
AHC0AAA141YG09
Plate: Plate_141_G09
AHC0AAA145YO10
Plate: Plate_145_O10
AHC0AAA147YD03
Plate: Plate_147_D03
AHC0AAA154YK08
Plate: Plate_154_K08
AHC0AAA81YG15
Plate: Plate_81_G15
AHC0AAA82YI23
Plate: Plate_82_I23
AHC0AAA91YN09
Plate: Plate_91_N09
AHC0AAA156YK10
Plate: Plate_156_K10
AHC0AAA98YO08
Plate: Plate_98_O08
AHC0AAA133YE14
Plate: Plate_133_E14
AHC0AAA95YM05
Plate: Plate_95_M05
AHC0AAA147YD01
Plate: Plate_147_D01
AHC0AAA133YM20
Plate: Plate_133_M20
AHC0AAA158YP21
Plate: Plate_158_P21
AHC0AAA133YO07
Plate: Plate_133_O07
AHC0AAA159YA04
Plate: Plate_159_A04
AHC0AAA165YM09
Plate: Plate_165_M09
AHC0AAA168YH07
Plate: Plate_168_H07
AHC0AAA166YF12
Plate: Plate_166_F12
AHC0AAA173YO24
Plate: Plate_173_O24
AHC0AAA173YC07
Plate: Plate_173_C07
AHC0AAA178YN18
Plate: Plate_178_N18
AHC0AAA176YK24
Plate: Plate_176_K24
AHC0AAA183YJ04
Plate: Plate_183_J04
AHC0AAA181YG09
Plate: Plate_181_G09
AHC0AAA192YL02
Plate: Plate_192_L02
AHC0AAA198YC10
Plate: Plate_198_C10
AHC0AAA188YB06
Plate: Plate_188_B06
AHC0AAA200YO09
Plate: Plate_200_O09
AHC0AAA207YL09
Plate: Plate_207_L09
AHC0AAA202YO11
Plate: Plate_202_O11
AHC0AAA211YE02
Plate: Plate_211_E02
AHC0AAA208YM14
Plate: Plate_208_M14
AHC0AAA219YE04
Plate: Plate_219_E04
AHC0AAA215YD21
Plate: Plate_215_D21
AHC0AAA219YK13
Plate: Plate_219_K13
AHC0AAA219YI04
Plate: Plate_219_I04
AHC0AAA219YP21
Plate: Plate_219_P21
AHC0AAA222YI22
Plate: Plate_222_I22
AHC0AAA233YM05
Plate: Plate_233_M05
AHC0AAA227YM02
Plate: Plate_227_M02
AHC0AAA241YM14
Plate: Plate_241_M14
AHC0AAA242YB16
Plate: Plate_242_B16
AHC0AAA239YG03
Plate: Plate_239_G03
AHC0AAA253YH12
Plate: Plate_253_H12
AHC0AAA249YO11
Plate: Plate_249_O11
AHC0AAA264YL09
Plate: Plate_264_L09
AHC0AAA264YO07
Plate: Plate_264_O07
AHC0AAA255YG17
Plate: Plate_255_G17
AHC0AAA269YM16
Plate: Plate_269_M16
AHC0AAA267YG11
Plate: Plate_267_G11
AHC0AAA98YO06
Plate: Plate_98_O06
n/a
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IPR Term | Analysis | Definition |
---|---|---|
RRM_dom | ProSiteProfiles | RNA recognition motif domain |
RRM_dom | Pfam | RNA recognition motif domain |
His_PPase_superfam | SUPERFAMILY | Histidine phosphatase superfamily |
His_PPase_superfam | Gene3D | Histidine phosphatase superfamily |
RRM_dom | SMART | RNA recognition motif domain |
His_Pase_superF_clade-1 | CDD | Histidine phosphatase superfamily, clade-1 |
RBD_domain_sf | SUPERFAMILY | RNA-binding domain superfamily |
Nucleotide-bd_a/b_plait_sf | Gene3D | Nucleotide-binding alpha-beta plait domain superfamily |
His_Pase_superF_clade-1 | Pfam | Histidine phosphatase superfamily, clade-1 |
GO Term | Annotation Origin | Type |
---|---|---|
nucleic acid binding | Blast | molecular function |
RNA binding | Blast | molecular function |
GTPase activator activity | Blast | molecular function |
protein binding | Blast | molecular function |
nucleus | Blast | cellular component |
nucleoplasm | Blast | cellular component |
mitochondrion | Blast | cellular component |
protein dephosphorylation | Blast | biological process |
membrane | Blast | cellular component |
integral component of membrane | Blast | cellular component |
dephosphorylation | Blast | biological process |
nuclear speck | Blast | cellular component |
hydrolase activity | Blast | molecular function |
identical protein binding | Blast | molecular function |
macromolecular complex binding | Blast | molecular function |
nucleolus | Blast | cellular component |
nuclear part | Blast | cellular component |
macromolecular complex | Blast | cellular component |
whole membrane | Blast | cellular component |
mitochondrial membrane | Blast | cellular component |
bounding membrane of organelle | Blast | cellular component |
GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
---|
GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
---|---|---|---|---|
fibrillar center | Hs | cellular component | 210 | 3.17e-66 |
nucleic acid binding | Hs | molecular function | 211 | 6.98e-66 |
RNA binding | Hs | molecular function | 211 | 6.98e-66 |
phosphoprotein phosphatase activity | Hs | molecular function | 159 | 1.09e-45 |
protein serine/threonine phosphatase activity | Hs | molecular function | 159 | 1.09e-45 |
GTPase activator activity | Hs | molecular function | 159 | 1.09e-45 |
protein binding | Hs | molecular function | 211 | 6.98e-66 |
nucleus | Hs | cellular component | 211 | 6.98e-66 |
nucleoplasm | Hs | cellular component | 211 | 6.98e-66 |
spliceosomal complex | Hs | cellular component | 211 | 6.98e-66 |
U1 snRNP | Hs | cellular component | 211 | 6.98e-66 |
U2 snRNP | Hs | cellular component | 210 | 3.17e-66 |
mitochondrion | Hs | cellular component | 159 | 1.09e-45 |
mitochondrial outer membrane | Hs | cellular component | 159 | 1.09e-45 |
signal transducer, downstream of receptor, with serine/threonine phosphatase activity | Hs | molecular function | 159 | 1.09e-45 |
membrane | Hs | cellular component | 159 | 1.09e-45 |
integral component of membrane | Hs | cellular component | 159 | 1.09e-45 |
nuclear speck | Hs | cellular component | 210 | 3.17e-66 |
hydrolase activity | Hs | molecular function | 159 | 1.09e-45 |
phosphatase activity | Hs | molecular function | 159 | 1.09e-45 |
intracellular ribonucleoprotein complex | Hs | cellular component | 211 | 6.98e-66 |
small nuclear ribonucleoprotein complex | Hs | cellular component | 210 | 3.17e-66 |
U1 snRNA binding | Hs | molecular function | 211 | 6.98e-66 |
snRNA stem-loop binding | Hs | molecular function | 211 | 6.98e-66 |
identical protein binding | Hs | molecular function | 211 | 6.98e-66 |
macromolecular complex binding | Hs | molecular function | 159 | 1.09e-45 |
snRNP binding | Hs | molecular function | 210 | 3.17e-66 |
U2-type catalytic step 2 spliceosome | Hs | cellular component | 210 | 3.17e-66 |
catalytic step 2 spliceosome | Hs | cellular component | 210 | 3.17e-66 |
U1 snRNP binding | Hs | molecular function | 211 | 6.98e-66 |
GO Term | Analysis | Type | e-value |
---|---|---|---|
nucleic acid binding | SUPERFAMILY | molecular function | 1.02E-19 |