Gene Card
Best human hits
CDK5RAP1; CDKAL1
Species
Unique Gene ID
Phmamm.g00000947
Gene Model ID
Phmamm.CG.MTP2014.S23.g00947
Location
S23:175688..180215
Transcript Models and Sequences
Genoscope Yasuo Villefranche
5 results
AHC0AAA10YP21
Plate: Plate_10_P21
AHC0AAA135YD20
Plate: Plate_135_D20
AHC0AAA93YH18
Plate: Plate_93_H18
AHC0AAA176YO20
Plate: Plate_176_O20
AHC0AAA188YG12
Plate: Plate_188_G12
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
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You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
10 results
| IPR Term | Analysis | Definition |
|---|---|---|
| rSAM | Pfam | Radical SAM |
| rSAM_horseshoe | Gene3D | Radical SAM, alpha/beta horseshoe |
| TRAM_dom | ProSiteProfiles | TRAM domain |
| Methylthiotransferase | TIGRFAM | Methylthiotransferase |
| rSAM | SFLD | Radical SAM |
| Methylthiotransferase_N | ProSiteProfiles | Methylthiotransferase, N-terminal |
| Elp3/MiaB/NifB | SMART | Elp3/MiaB/NifB |
| TRAM_dom | Pfam | TRAM domain |
| Methylthiotransferase_CS | ProSitePatterns | Methylthiotransferase, conserved site |
| MiaB-like_B | TIGRFAM | MiaB-like tRNA modifying enzyme, archaeal-type |
GOSlim
13 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| catalytic activity | Blast | molecular function |
| protein binding | Blast | molecular function |
| cytoplasm | Blast | cellular component |
| mitochondrion | Blast | cellular component |
| endoplasmic reticulum | Blast | cellular component |
| endoplasmic reticulum membrane | Blast | cellular component |
| membrane | Blast | cellular component |
| integral component of membrane | Blast | cellular component |
| transferase activity | Blast | molecular function |
| protein kinase binding | Blast | molecular function |
| metal ion binding | Blast | molecular function |
| RNA processing | Blast | biological process |
| cofactor binding | Blast | molecular function |
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|
GO (Blast)
17 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| catalytic activity | Hs | molecular function | 589 | 0.0 |
| protein binding | Hs | molecular function | 589 | 0.0 |
| cytoplasm | Hs | cellular component | 79.0 | 1.19e-15 |
| mitochondrion | Hs | cellular component | 79.0 | 1.19e-15 |
| endoplasmic reticulum | Hs | cellular component | 589 | 0.0 |
| endoplasmic reticulum membrane | Hs | cellular component | 589 | 0.0 |
| rough endoplasmic reticulum | Hs | cellular component | 589 | 0.0 |
| membrane | Hs | cellular component | 589 | 0.0 |
| integral component of membrane | Hs | cellular component | 589 | 0.0 |
| transferase activity | Hs | molecular function | 589 | 0.0 |
| protein kinase binding | Hs | molecular function | 79.0 | 1.19e-15 |
| N6-isopentenyladenosine methylthiotransferase activity | Hs | molecular function | 79.0 | 1.19e-15 |
| N6-threonylcarbomyladenosine methylthiotransferase activity | Hs | molecular function | 589 | 0.0 |
| metal ion binding | Hs | molecular function | 589 | 0.0 |
| iron-sulfur cluster binding | Hs | molecular function | 589 | 0.0 |
| 4 iron, 4 sulfur cluster binding | Hs | molecular function | 589 | 0.0 |
| tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase | Hs | molecular function | 589 | 0.0 |
GO (InterProScan)
5 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| catalytic activity | SMART | molecular function | 2.1E-36 |
| tRNA modification | TIGRFAM | biological process | 4.1E-80 |
| transferase activity | TIGRFAM | molecular function | 4.1E-80 |
| iron-sulfur cluster binding | SMART | molecular function | 2.1E-36 |
| 4 iron, 4 sulfur cluster binding | TIGRFAM | molecular function | 4.1E-80 |
