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GENE CARD

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Gene Card

Best human hits

EMC2; TTC21B; TTC7A

Species

P.mammillata

Unique Gene ID

Phmamm.g00001115

Gene Model ID

Phmamm.CG.MTP2014.S27.g01115

Location

S27:273287..274349

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S27.g01115.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

12 results

AHC0AAA15YK13

Plate: Plate_15_K13

AHC0AAA64YP22

Plate: Plate_64_P22

AHC0AAA102YB23

Plate: Plate_102_B23

AHC0AAA107YG07

Plate: Plate_107_G07

AHC0AAA118YI18

Plate: Plate_118_I18

AHC0AAA151YG17

Plate: Plate_151_G17

AHC0AAA90YN21

Plate: Plate_90_N21

AHC0AAA93YP12

Plate: Plate_93_P12

AHC0AAA195YH10

Plate: Plate_195_H10

AHC0AAA224YG22

Plate: Plate_224_G22

AHC0AAA235YC14

Plate: Plate_235_C14

AHC0AAA258YI07

Plate: Plate_258_I07

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
TPR-like_helical_dom_sf SUPERFAMILY Tetratricopeptide-like helical domain superfamily
TPR-contain_dom ProSiteProfiles Tetratricopeptide repeat-containing domain
TPR-like_helical_dom_sf Gene3D Tetratricopeptide-like helical domain superfamily

GOSlim

19 results

GO Term Annotation Origin Type
protein binding Orthology molecular function
nucleus Orthology cellular component
cytoplasm Orthology cellular component
mitochondrion Orthology cellular component
endoplasmic reticulum Orthology cellular component
cytoskeleton Blast cellular component
plasma membrane Blast cellular component
membrane Blast cellular component
cell projection Blast cellular component
protein folding Orthology biological process
endoplasmic reticulum membrane Orthology cellular component
macromolecular complex Orthology cellular component
integral component of membrane Orthology cellular component
intracellular non-membrane-bounded organelle Blast cellular component
nuclear lumen Blast cellular component
organelle Blast cellular component
plasma membrane region Blast cellular component
organelle part Blast cellular component
cell projection part Blast cellular component

GO (Orthology)

7 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
protein binding Hs molecular function
nucleus Hs cellular component
cytoplasm Hs cellular component
mitochondrion Hs cellular component
endoplasmic reticulum Hs cellular component
protein folding in endoplasmic reticulum Hs biological process
ER membrane protein complex Hs cellular component

GO (Blast)

14 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nuclear chromatin Hs cellular component 40.8 0.001
protein binding Hs molecular function 254 2.12e-83
nucleus Hs cellular component 254 2.12e-83
cytoplasm Hs cellular component 254 2.12e-83
mitochondrion Hs cellular component 254 2.12e-83
endoplasmic reticulum Hs cellular component 254 2.12e-83
cytoskeleton Hs cellular component 40.8 0.001
plasma membrane Hs cellular component 40.4 0.001
cilium Hs cellular component 40.8 0.001
membrane Hs cellular component 40.4 0.001
intraciliary transport particle A Hs cellular component 40.8 0.001
cell projection Hs cellular component 40.8 0.001
ER membrane protein complex Hs cellular component 254 2.12e-83
ciliary tip Hs cellular component 40.8 0.001

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding Gene3D molecular function 1.2E-20