Aniseed - Gene card

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Genoscope Yasuo Villefranche

10 results

AHC0AAA98YI11

Plate: Plate_98_I11

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

21 results

IPR Term	Analysis	Definition
WD40_repeat_dom	ProSiteProfiles	WD40-repeat-containing domain
WD40_repeat	ProSiteProfiles	WD40 repeat
SPRY_dom	Pfam	SPRY domain
Reg_chr_condens	ProSiteProfiles	Regulator of chromosome condensation, RCC1
HECT_dom	SMART	HECT domain
RCC1/BLIP-II	SUPERFAMILY	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II
WD40_repeat_dom_sf	SUPERFAMILY	WD40-repeat-containing domain superfamily
B30.2/SPRY	ProSiteProfiles	B30.2/SPRY domain
HECT_dom	ProSiteProfiles	HECT domain
Reg_chr_condens	ProSitePatterns	Regulator of chromosome condensation, RCC1
ConA-like_dom_sf	SUPERFAMILY	Concanavalin A-like lectin/glucanase domain superfamily
WD40_repeat	SMART	WD40 repeat
RCC1/BLIP-II	Gene3D	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II
Hect_E3_ubiquitin_ligase	SUPERFAMILY	HECT, E3 ligase catalytic domain
Reg_chr_condens	Pfam	Regulator of chromosome condensation, RCC1
Reg_chr_condens	PRINTS	Regulator of chromosome condensation, RCC1
WD40_repeat	Pfam	WD40 repeat
Apc4_WD40_dom	Pfam	Anaphase-promoting complex subunit 4, WD40 domain
SPRY_HERC1	CDD	HERC1, SPRY domain
HECT_dom	Pfam	HECT domain
SPRY_dom	SMART	SPRY domain

GOSlim

25 results

GO Term	Annotation Origin	Type
ubiquitin-protein transferase activity	Orthology	molecular function
protein binding	Orthology	molecular function
nucleus	Blast	cellular component
nucleoplasm	Blast	cellular component
cytoplasm	Orthology	cellular component
mitochondrial inner membrane	Blast	cellular component
Golgi apparatus	Orthology	cellular component
cytosol	Orthology	cellular component
cytoskeleton	Blast	cellular component
zinc ion binding	Blast	molecular function
membrane	Orthology	cellular component
protein ubiquitination	Orthology	biological process
transferase activity	Orthology	molecular function
neuron projection development	Orthology	biological process
ubiquitin protein ligase binding	Blast	molecular function
metal ion binding	Blast	molecular function
regulation of molecular function	Orthology	biological process
enzyme binding	Orthology	molecular function
molecular function regulator	Orthology	molecular function
neuron differentiation	Orthology	biological process
anatomical structure formation involved in morphogenesis	Orthology	biological process
brain development	Orthology	biological process
nervous system process	Orthology	biological process
cytoplasmic part	Blast	cellular component
microtubule organizing center	Blast	cellular component

GO (Orthology)

15 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
ubiquitin-protein transferase activity	Hs	molecular function
guanyl-nucleotide exchange factor activity	Hs	molecular function
ARF guanyl-nucleotide exchange factor activity	Hs	molecular function
protein binding	Hs	molecular function
cytoplasm	Hs	cellular component
Golgi apparatus	Hs	cellular component
cytosol	Hs	cellular component
negative regulation of autophagy	Hs	biological process
membrane	Hs	cellular component
protein ubiquitination	Hs	biological process
transferase activity	Hs	molecular function
cerebellar Purkinje cell differentiation	Hs	biological process
neuron projection development	Hs	biological process
neuromuscular process controlling balance	Hs	biological process
regulation of molecular function	Hs	biological process

GO (Blast)

19 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
ubiquitin-protein transferase activity	Hs	molecular function	1537	0.0
guanyl-nucleotide exchange factor activity	Hs	molecular function	1537	0.0
ARF guanyl-nucleotide exchange factor activity	Hs	molecular function	1537	0.0
protein binding	Hs	molecular function	1537	0.0
nucleus	Hs	cellular component	597	9.01e-175
nucleoplasm	Hs	cellular component	597	8.51e-171
cytoplasm	Hs	cellular component	1537	0.0
mitochondrial inner membrane	Hs	cellular component	597	8.51e-171
Golgi apparatus	Hs	cellular component	1537	0.0
centriole	Hs	cellular component	597	8.51e-171
cytosol	Hs	cellular component	1537	0.0
cytoskeleton	Hs	cellular component	597	8.51e-171
zinc ion binding	Hs	molecular function	597	8.51e-171
membrane	Hs	cellular component	1537	0.0
transferase activity	Hs	molecular function	1537	0.0
ubiquitin protein ligase binding	Hs	molecular function	597	8.51e-171
SUMO binding	Hs	molecular function	597	8.51e-171
metal ion binding	Hs	molecular function	597	8.51e-171
ubiquitin protein ligase activity	Hs	molecular function	597	9.01e-175

GO (InterProScan)

2 results

GO Term	Analysis	Type	e-value
ubiquitin-protein transferase activity	SMART	molecular function	2.7E-88
protein binding	SUPERFAMILY	molecular function	4.27E-32

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location

Transcript Models and Sequences

External database links

Genoscope Yasuo Villefranche

AHC0AAA16YN19

AHC0AAA80YF17

AHC0AAA101YF11

AHC0AAA112YA04

AHC0AAA128YK10

AHC0AAA137YP11

AHC0AAA98YG09

AHC0AAA193YJ10