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  1. Gene 'Phfumi.CG.MTP2014.S3...' > 
  2. Gene 'Harore.CG.MTP2014.S2...' > 
  3. Gene 'Phmamm.CG.MTP2014.S7...'

Gene Card

Best human hits

CLEC4E; CLEC4F; OLA1

Species

P.mammillata

Unique Gene ID

Phmamm.g00002509

Gene Model ID

Phmamm.CG.MTP2014.S71.g02509

Location

S71:250449..256270

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S71.g02509.01.t
Phmamm.CG.MTP2014.S71.g02509.02.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

30 results

AHC0AAA15YF04

Plate: Plate_15_F04

AHC0AAA17YJ08

Plate: Plate_17_J08

AHC0AAA2YE15

Plate: Plate_2_E15

AHC0AAA23YE17

Plate: Plate_23_E17

AHC0AAA24YM15

Plate: Plate_24_M15

AHC0AAA25YG01

Plate: Plate_25_G01

AHC0AAA4YJ11

Plate: Plate_4_J11

AHC0AAA46YO06

Plate: Plate_46_O06

AHC0AAA49YA15

Plate: Plate_49_A15

AHC0AAA55YB03

Plate: Plate_55_B03

AHC0AAA55YL04

Plate: Plate_55_L04

AHC0AAA77YC01

Plate: Plate_77_C01

AHC0AAA105YD17

Plate: Plate_105_D17

AHC0AAA107YF23

Plate: Plate_107_F23

AHC0AAA117YD10

Plate: Plate_117_D10

AHC0AAA81YP24

Plate: Plate_81_P24

AHC0AAA84YN01

Plate: Plate_84_N01

AHC0AAA163YI15

Plate: Plate_163_I15

AHC0AAA174YI12

Plate: Plate_174_I12

AHC0AAA212YD14

Plate: Plate_212_D14

AHC0AAA221YC11

Plate: Plate_221_C11

AHC0AAA221YF18

Plate: Plate_221_F18

AHC0AAA228YM10

Plate: Plate_228_M10

AHC0AAA242YK14

Plate: Plate_242_K14

AHC0AAA249YB02

Plate: Plate_249_B02

AHC0AAA251YL12

Plate: Plate_251_L12

AHC0AAA251YP18

Plate: Plate_251_P18

AHC0AAA263YF13

Plate: Plate_263_F13

AHC0AAA55YB01

Plate: Plate_55_B01

AHC0AAA55YL02

Plate: Plate_55_L02

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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No Phylogeny Tree for this Gene.
Gene Annotations

InterPro

15 results

IPR Term Analysis Definition
TGS-like_dom_sf Gene3D TGS-like domain superfamily
GTP_binding_domain Pfam GTP binding domain
GTP_binding_domain PRINTS GTP binding domain
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase
C-type_lectin-like Pfam C-type lectin-like
C-type_lectin-like ProSiteProfiles C-type lectin-like
Beta-grasp_dom_sf Gene3D Beta-grasp domain superfamily
CTDL_fold SUPERFAMILY C-type lectin fold
ATPase_YchF/OLA1 TIGRFAM Ribosome-binding ATPase YchF/Obg-like ATPase 1
TGS-like SUPERFAMILY TGS-like
YchF_C Pfam YchF, C-terminal domain
G_OBG ProSiteProfiles OBG-type guanine nucleotide-binding (G) domain
C-type_lectin-like SMART C-type lectin-like
ATPase_YchF/OLA1 Hamap Ribosome-binding ATPase YchF/Obg-like ATPase 1
ATPase_YchF/OLA1 PIRSF Ribosome-binding ATPase YchF/Obg-like ATPase 1

GOSlim

24 results

GO Term Annotation Origin Type
nucleotide binding Blast molecular function
protein binding Blast molecular function
ATP binding Blast molecular function
GTP binding Blast molecular function
extracellular region Blast cellular component
nucleus Blast cellular component
nucleolus Blast cellular component
cytoplasm Blast cellular component
centrosome Blast cellular component
cytosol Blast cellular component
plasma membrane Blast cellular component
membrane Blast cellular component
integral component of membrane Blast cellular component
hydrolase activity Blast molecular function
metal ion binding Blast molecular function
extracellular exosome Blast cellular component
nucleoside-triphosphatase activity Blast molecular function
binding Blast molecular function
intracellular organelle part Blast cellular component
cytoplasmic vesicle Blast cellular component
endomembrane system Blast cellular component
intracellular organelle lumen Blast cellular component
macromolecular complex binding Blast molecular function
cell adhesion molecule binding Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

23 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
nucleotide binding Hs molecular function 519 1.09e-176
receptor activity Hs molecular function 47.8 9.66e-06
protein binding Hs molecular function 519 1.09e-176
ATP binding Hs molecular function 519 1.09e-176
GTP binding Hs molecular function 519 1.09e-176
extracellular region Hs cellular component 519 1.09e-176
nucleus Hs cellular component 519 1.09e-176
nucleolus Hs cellular component 519 1.09e-176
cytoplasm Hs cellular component 519 1.09e-176
centrosome Hs cellular component 519 1.09e-176
cytosol Hs cellular component 519 1.09e-176
plasma membrane Hs cellular component 47.8 9.66e-06
membrane Hs cellular component 519 1.09e-176
integral component of membrane Hs cellular component 49.3 1.06e-05
hydrolase activity Hs molecular function 519 1.09e-176
ATPase activity Hs molecular function 519 1.09e-176
carbohydrate binding Hs molecular function 49.3 1.06e-05
platelet alpha granule lumen Hs cellular component 519 1.09e-176
ribosome binding Hs molecular function 519 1.09e-176
ribosomal large subunit binding Hs molecular function 519 1.09e-176
cadherin binding Hs molecular function 519 1.09e-176
metal ion binding Hs molecular function 519 1.09e-176
extracellular exosome Hs cellular component 519 1.09e-176

GO (InterProScan)

1 result

GO Term Analysis Type e-value
GTP binding TIGRFAM molecular function 3.2E-118

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