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GENE CARD

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  1. Gene 'Phmamm.CG.MTP2014.S6...'
  2. Gene 'KH2012:KH.C4.633'

Gene Card

Best human hits

ADAMTS16; ADAMTS18; ADAMTSL5

Species

P.mammillata

Unique Gene ID

Phmamm.g00002839

Gene Model ID

Phmamm.CG.MTP2014.S85.g02839

Location

S85:233689..246113

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

7 results

AHC0AAA112YG11

Plate: Plate_112_G11

AHC0AAA124YF01

Plate: Plate_124_F01

AHC0AAA130YN10

Plate: Plate_130_N10

AHC0AAA193YK04

Plate: Plate_193_K04

AHC0AAA211YI18

Plate: Plate_211_I18

AHC0AAA231YD21

Plate: Plate_231_D21

AHC0AAA258YF22

Plate: Plate_258_F22

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

10 results

IPR Term Analysis Definition
TSP1_rpt ProSiteProfiles Thrombospondin type-1 (TSP1) repeat
TSP1_rpt SMART Thrombospondin type-1 (TSP1) repeat
Netrin_module_non-TIMP Pfam Netrin module, non-TIMP type
TSP1_rpt_sf Gene3D Thrombospondin type-1 (TSP1) repeat superfamily
TSP1_rpt_sf SUPERFAMILY Thrombospondin type-1 (TSP1) repeat superfamily
Netrin_module_non-TIMP SMART Netrin module, non-TIMP type
Netrin_domain ProSiteProfiles Netrin domain
TSP1_rpt Pfam Thrombospondin type-1 (TSP1) repeat
TIMP-like_OB-fold SUPERFAMILY Tissue inhibitor of metalloproteinases-like, OB-fold
ADAM_spacer1 Pfam ADAM-TS Spacer 1

GOSlim

7 results

GO Term Annotation Origin Type
metalloendopeptidase activity Blast molecular function
protein binding Orthology molecular function
extracellular region Orthology cellular component
peptidase activity Blast molecular function
metallopeptidase activity Blast molecular function
hydrolase activity Blast molecular function
metal ion binding Blast molecular function

GO (Orthology)

3 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
protein binding Hs molecular function
extracellular region Hs cellular component
proteinaceous extracellular matrix Hs cellular component

GO (Blast)

8 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
metalloendopeptidase activity Hs molecular function 189 7.85e-51
protein binding Hs molecular function 235 1.32e-70
extracellular region Hs cellular component 235 1.32e-70
proteinaceous extracellular matrix Hs cellular component 235 1.32e-70
peptidase activity Hs molecular function 189 7.85e-51
metallopeptidase activity Hs molecular function 189 7.85e-51
hydrolase activity Hs molecular function 189 7.85e-51
metal ion binding Hs molecular function 189 7.85e-51

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding ProSiteProfiles molecular function 14.594