Aniseed - Gene card

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Genoscope Yasuo Villefranche

95 results

AHC0AAA39YG06

Plate: Plate_39_G06

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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No Phylogeny Tree for this Gene.

Gene Annotations

InterPro

17 results

IPR Term	Analysis	Definition
Sushi_SCR_CCP_dom	CDD	Sushi/SCR/CCP domain
Somatomedin_B-like_dom_sf	SUPERFAMILY	Somatomedin B-like domain superfamily
EGF_Ca-bd_CS	ProSitePatterns	EGF-like calcium-binding, conserved site
Sushi_SCR_CCP_dom	SMART	Sushi/SCR/CCP domain
Sushi_SCR_CCP_dom	ProSiteProfiles	Sushi/SCR/CCP domain
EGF-like_dom	ProSiteProfiles	EGF-like domain
EGF-like_Ca-bd_dom	Pfam	EGF-like calcium-binding domain
Sushi/SCR/CCP_sf	SUPERFAMILY	Sushi/SCR/CCP superfamily
EGF-like_CS	ProSitePatterns	EGF-like, conserved site
Somatomedin_B_dom	Pfam	Somatomedin B domain
Sushi_SCR_CCP_dom	Pfam	Sushi/SCR/CCP domain
Somatomedin_B_dom	ProSitePatterns	Somatomedin B domain
WxxW_domain	Pfam	WxxW domain
EGF-like_dom	SMART	EGF-like domain
EGF-type_Asp/Asn_hydroxyl_site	ProSitePatterns	EGF-type aspartate/asparagine hydroxylation site
EGF-like_Ca-bd_dom	SMART	EGF-like calcium-binding domain
Somatomedin_B_dom	ProSiteProfiles	Somatomedin B domain

GOSlim

39 results

GO Term	Annotation Origin	Type
integrin binding	Blast	molecular function
calcium ion binding	Blast	molecular function
protein binding	Blast	molecular function
extracellular region	Blast	cellular component
extracellular space	Blast	cellular component
cell	Blast	cellular component
endoplasmic reticulum lumen	Blast	cellular component
plasma membrane	Blast	cellular component
membrane	Blast	cellular component
integral component of membrane	Blast	cellular component
basolateral plasma membrane	Blast	cellular component
apical plasma membrane	Blast	cellular component
identical protein binding	Blast	molecular function
cell projection	Blast	cellular component
macromolecular complex binding	Blast	molecular function
extracellular exosome	Blast	cellular component
immune response	InterProScan	biological process
cytoskeletal part	Blast	cellular component
microtubule cytoskeleton	Blast	cellular component
extracellular region part	Blast	cellular component
receptor binding	Blast	molecular function
molecular function regulator	Blast	molecular function
regulation of signal transduction	Blast	biological process
signaling receptor activity	Blast	molecular function
structural molecule activity	Blast	molecular function
Golgi apparatus part	Blast	cellular component
intracellular organelle lumen	Blast	cellular component
organelle	Blast	cellular component
plasma membrane region	Blast	cellular component
macromolecular complex	Blast	cellular component
anion binding	Blast	molecular function
carbohydrate derivative binding	Blast	molecular function
membrane part	Blast	cellular component
intrinsic component of membrane	Blast	cellular component
cell projection membrane	Blast	cellular component
bounding membrane of organelle	Blast	cellular component
membrane organization	InterProScan	biological process
organelle organization	InterProScan	biological process
binding	InterProScan	molecular function

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

31 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
spindle pole	Hs	cellular component	74.3	2.16e-14
microfibril	Hs	cellular component	74.3	2.87e-14
integrin binding	Hs	molecular function	74.3	2.87e-14
hormone activity	Hs	molecular function	74.3	2.87e-14
extracellular matrix structural constituent	Hs	molecular function	74.3	2.87e-14
calcium ion binding	Hs	molecular function	74.3	2.16e-14
protein binding	Hs	molecular function	74.3	2.87e-14
extracellular region	Hs	cellular component	74.3	2.16e-14
proteinaceous extracellular matrix	Hs	cellular component	74.3	2.87e-14
basement membrane	Hs	cellular component	74.3	2.87e-14
extracellular space	Hs	cellular component	74.3	2.87e-14
cell	Hs	cellular component	71.2	2.35e-13
endoplasmic reticulum lumen	Hs	cellular component	74.3	2.87e-14
Golgi lumen	Hs	cellular component	74.3	2.16e-14
plasma membrane	Hs	cellular component	74.3	2.16e-14
cilium	Hs	cellular component	74.3	2.16e-14
heparin binding	Hs	molecular function	74.3	2.87e-14
membrane	Hs	cellular component	74.3	2.16e-14
integral component of membrane	Hs	cellular component	74.3	2.16e-14
basolateral plasma membrane	Hs	cellular component	74.3	2.16e-14
apical plasma membrane	Hs	cellular component	74.3	2.16e-14
IgG binding	Hs	molecular function	74.3	2.16e-14
extrinsic component of membrane	Hs	cellular component	74.3	2.16e-14
extracellular matrix constituent conferring elasticity	Hs	molecular function	74.3	2.87e-14
extracellular matrix	Hs	cellular component	74.3	2.87e-14
anchored component of membrane	Hs	cellular component	74.3	2.16e-14
identical protein binding	Hs	molecular function	74.3	2.87e-14
cell projection	Hs	cellular component	74.3	2.16e-14
macromolecular complex binding	Hs	molecular function	74.3	2.87e-14
ciliary membrane	Hs	cellular component	74.3	2.16e-14
extracellular exosome	Hs	cellular component	74.3	2.16e-14

GO (InterProScan)

4 results

GO Term	Analysis	Type	e-value
calcium ion binding	Pfam	molecular function	2.4E-12
scavenger receptor activity	SUPERFAMILY	molecular function	5.75E-6
immune response	SUPERFAMILY	biological process	5.75E-6
polysaccharide binding	SUPERFAMILY	molecular function	5.75E-6

Gene Card

Best human hits

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Unique Gene ID

Gene Model ID

Location

Transcript Models and Sequences

External database links

Genoscope Yasuo Villefranche

Regulatory Regions

InterPro

GOSlim

GO (Orthology)

GO (Blast)

GO (InterProScan)