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GENE CARD

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Gene Card

Best human hits

MALRD1; MFRP; TMPRSS15

Species

P.mammillata

Unique Gene ID

Phmamm.g00003881

Gene Model ID

Phmamm.CG.MTP2014.S131.g03881

Location

S131:199877..211660

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

19 results

AHC0AAA7YB24

Plate: Plate_7_B24

AHC0AAA39YK14

Plate: Plate_39_K14

AHC0AAA50YK18

Plate: Plate_50_K18

AHC0AAA67YL17

Plate: Plate_67_L17

AHC0AAA74YG11

Plate: Plate_74_G11

AHC0AAA109YC06

Plate: Plate_109_C06

AHC0AAA128YH15

Plate: Plate_128_H15

AHC0AAA131YF02

Plate: Plate_131_F02

AHC0AAA86YK03

Plate: Plate_86_K03

AHC0AAA91YM03

Plate: Plate_91_M03

AHC0AAA175YI14

Plate: Plate_175_I14

AHC0AAA181YE19

Plate: Plate_181_E19

AHC0AAA190YA22

Plate: Plate_190_A22

AHC0AAA192YA14

Plate: Plate_192_A14

AHC0AAA200YM08

Plate: Plate_200_M08

AHC0AAA233YK23

Plate: Plate_233_K23

AHC0AAA245YN07

Plate: Plate_245_N07

AHC0AAA250YB02

Plate: Plate_250_B02

AHC0AAA39YM16

Plate: Plate_39_M16

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
LDL_receptor-like_sf SUPERFAMILY LDL receptor-like superfamily
LDrepeatLR_classA_rpt CDD Low-density lipoprotein (LDL) receptor class A repeat
LDrepeatLR_classA_rpt ProSiteProfiles Low-density lipoprotein (LDL) receptor class A repeat
LDrepeatLR_classA_rpt Pfam Low-density lipoprotein (LDL) receptor class A repeat
LDrepeatLR_classA_rpt SMART Low-density lipoprotein (LDL) receptor class A repeat

GOSlim

17 results

GO Term Annotation Origin Type
serine-type endopeptidase activity Blast molecular function
protein binding Blast molecular function
cytoplasm Blast cellular component
Golgi apparatus Blast cellular component
plasma membrane Blast cellular component
brush border Blast cellular component
peptidase activity Blast molecular function
serine-type peptidase activity Blast molecular function
membrane Blast cellular component
integral component of membrane Blast cellular component
apical plasma membrane Blast cellular component
hydrolase activity Blast molecular function
cytoplasmic vesicle Blast cellular component
membrane organization Blast biological process
organelle organization Blast biological process
intracellular organelle part Blast cellular component
organelle membrane Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

15 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
serine-type endopeptidase activity Hs molecular function 51.6 6.84e-07
scavenger receptor activity Hs molecular function 51.6 6.84e-07
protein binding Hs molecular function 51.6 6.84e-07
cytoplasm Hs cellular component 42.4 6.23e-04
Golgi apparatus Hs cellular component 42.4 6.23e-04
plasma membrane Hs cellular component 45.4 4.66e-05
brush border Hs cellular component 51.6 6.84e-07
peptidase activity Hs molecular function 51.6 6.84e-07
serine-type peptidase activity Hs molecular function 51.6 6.84e-07
membrane Hs cellular component 51.6 6.84e-07
integral component of membrane Hs cellular component 51.6 6.84e-07
apical plasma membrane Hs cellular component 45.4 4.66e-05
hydrolase activity Hs molecular function 51.6 6.84e-07
cytoplasmic vesicle membrane Hs cellular component 42.4 6.23e-04
cytoplasmic vesicle Hs cellular component 42.4 6.23e-04

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding SUPERFAMILY molecular function 3.4E-9