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GENE CARD

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  1. Gene 'Phmamm.CG.MTP2014.S1...'

Gene Card

Best human hits

RPL6

Species

P.mammillata

Unique Gene ID

Phmamm.g00004608

Gene Model ID

Phmamm.CG.MTP2014.S167.g04608

Location

S167:125962..127233

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

29 results

AHC0AAA10YD17

Plate: Plate_10_D17

AHC0AAA36YI06

Plate: Plate_36_I06

AHC0AAA44YJ15

Plate: Plate_44_J15

AHC0AAA45YF16

Plate: Plate_45_F16

AHC0AAA46YE12

Plate: Plate_46_E12

AHC0AAA48YB02

Plate: Plate_48_B02

AHC0AAA68YN08

Plate: Plate_68_N08

AHC0AAA70YH16

Plate: Plate_70_H16

AHC0AAA75YB18

Plate: Plate_75_B18

AHC0AAA79YA15

Plate: Plate_79_A15

AHC0AAA106YG22

Plate: Plate_106_G22

AHC0AAA112YL02

Plate: Plate_112_L02

AHC0AAA113YM04

Plate: Plate_113_M04

AHC0AAA118YG02

Plate: Plate_118_G02

AHC0AAA150YK08

Plate: Plate_150_K08

AHC0AAA106YI24

Plate: Plate_106_I24

AHC0AAA172YM15

Plate: Plate_172_M15

AHC0AAA184YP14

Plate: Plate_184_P14

AHC0AAA201YO22

Plate: Plate_201_O22

AHC0AAA206YN20

Plate: Plate_206_N20

AHC0AAA215YC12

Plate: Plate_215_C12

AHC0AAA216YN10

Plate: Plate_216_N10

AHC0AAA232YD02

Plate: Plate_232_D02

AHC0AAA234YD02

Plate: Plate_234_D02

AHC0AAA234YO24

Plate: Plate_234_O24

AHC0AAA246YO14

Plate: Plate_246_O14

AHC0AAA263YF22

Plate: Plate_263_F22

AHC0AAA266YJ05

Plate: Plate_266_J05

AHC0AAA268YB04

Plate: Plate_268_B04

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
Translation_prot_SH3-like_sf SUPERFAMILY Translation protein SH3-like domain superfamily
Ribosomal_L6_N Pfam Ribosomal protein L6, N-terminal
60S_ribosomal_L6E PANTHER 60S ribosomal protein L6E

GOSlim

21 results

GO Term Annotation Origin Type
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay Orthology biological process
DNA binding Orthology molecular function
RNA binding Orthology molecular function
structural constituent of ribosome Orthology molecular function
intracellular Orthology cellular component
nucleus Orthology cellular component
cytoplasm Orthology cellular component
endoplasmic reticulum Orthology cellular component
cytosol Orthology cellular component
ribosome Orthology cellular component
focal adhesion Orthology cellular component
regulation of transcription, DNA-templated Orthology biological process
translational initiation Orthology biological process
SRP-dependent cotranslational protein targeting to membrane Orthology biological process
membrane Orthology cellular component
RNA processing Orthology biological process
intracellular organelle part Orthology cellular component
cytoplasmic part Orthology cellular component
intracellular non-membrane-bounded organelle Orthology cellular component
macromolecular complex Orthology cellular component
cell adhesion molecule binding Orthology molecular function

GO (Orthology)

25 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
ribosomal large subunit assembly Hs biological process
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay Hs biological process
cytoplasmic translation Hs biological process
DNA binding Hs molecular function
RNA binding Hs molecular function
structural constituent of ribosome Hs molecular function
intracellular Hs cellular component
nucleus Hs cellular component
cytoplasm Hs cellular component
endoplasmic reticulum Hs cellular component
rough endoplasmic reticulum Hs cellular component
cytosol Hs cellular component
ribosome Hs cellular component
focal adhesion Hs cellular component
regulation of transcription, DNA-templated Hs biological process
rRNA processing Hs biological process
translation Hs biological process
translational initiation Hs biological process
SRP-dependent cotranslational protein targeting to membrane Hs biological process
membrane Hs cellular component
cytosolic large ribosomal subunit Hs cellular component
intracellular ribonucleoprotein complex Hs cellular component
cytoplasmic ribonucleoprotein granule Hs cellular component
polysomal ribosome Hs cellular component
cadherin binding Hs molecular function

GO (Blast)

17 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
DNA binding Hs molecular function 149 5.83e-45
RNA binding Hs molecular function 149 5.83e-45
structural constituent of ribosome Hs molecular function 149 5.83e-45
intracellular Hs cellular component 149 5.83e-45
nucleus Hs cellular component 149 5.83e-45
cytoplasm Hs cellular component 149 5.83e-45
endoplasmic reticulum Hs cellular component 149 5.83e-45
rough endoplasmic reticulum Hs cellular component 149 5.83e-45
cytosol Hs cellular component 149 5.83e-45
ribosome Hs cellular component 149 5.83e-45
focal adhesion Hs cellular component 149 5.83e-45
membrane Hs cellular component 149 5.83e-45
cytosolic large ribosomal subunit Hs cellular component 149 5.83e-45
intracellular ribonucleoprotein complex Hs cellular component 149 5.83e-45
cytoplasmic ribonucleoprotein granule Hs cellular component 149 5.83e-45
polysomal ribosome Hs cellular component 149 5.83e-45
cadherin binding Hs molecular function 149 5.83e-45

GO (InterProScan)

4 results

GO Term Analysis Type e-value
structural constituent of ribosome PANTHER molecular function 1.9E-43
intracellular PANTHER cellular component 1.9E-43
ribosome PANTHER cellular component 1.9E-43
translation PANTHER biological process 1.9E-43