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GENE CARD

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Gene Card

Best human hits

AAMP; BRWD1; DAW1

Species

P.mammillata

Unique Gene ID

Phmamm.g00004825

Gene Model ID

Phmamm.CG.MTP2014.S179.g04825

Location

S179:40459..44504

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S179.g04825.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

4 results

AHC0AAA19YM01

Plate: Plate_19_M01

AHC0AAA55YK23

Plate: Plate_55_K23

AHC0AAA130YK20

Plate: Plate_130_K20

AHC0AAA55YK21

Plate: Plate_55_K21

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term Analysis Definition
WD40/YVTN_repeat-like_dom_sf Gene3D WD40/YVTN repeat-like-containing domain superfamily
WD40_repeat ProSiteProfiles WD40 repeat
WD40_repeat_CS ProSitePatterns WD40 repeat, conserved site
WD40_repeat_dom ProSiteProfiles WD40-repeat-containing domain
WD40_repeat_dom_sf SUPERFAMILY WD40-repeat-containing domain superfamily
WD40_repeat Pfam WD40 repeat
WD40_repeat SMART WD40 repeat

GOSlim

21 results

GO Term Annotation Origin Type
angiogenesis Orthology biological process
protein binding Orthology molecular function
nucleus Blast cellular component
nucleoplasm Blast cellular component
nucleolus Blast cellular component
cytoplasm Orthology cellular component
cytosol Orthology cellular component
plasma membrane Orthology cellular component
multicellular organism development Orthology biological process
cell surface Orthology cellular component
microtubule cytoskeleton Orthology cellular component
membrane Orthology cellular component
cell differentiation Orthology biological process
cell projection Blast cellular component
unfolded protein binding Orthology molecular function
anion binding Orthology molecular function
carbohydrate derivative binding Orthology molecular function
macromolecular complex Orthology cellular component
extracellular region part Orthology cellular component
organelle Blast cellular component
plasma membrane region Blast cellular component

GO (Orthology)

15 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
angiogenesis Hs biological process
protein binding Hs molecular function
cytoplasm Hs cellular component
cytosol Hs cellular component
plasma membrane Hs cellular component
multicellular organism development Hs biological process
heparin binding Hs molecular function
cell surface Hs cellular component
microtubule cytoskeleton Hs cellular component
membrane Hs cellular component
cell differentiation Hs biological process
preribosome, large subunit precursor Hs cellular component
ribosomal large subunit biogenesis Hs biological process
intercellular bridge Hs cellular component
unfolded protein binding Hs molecular function

GO (Blast)

16 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
protein binding Hs molecular function 259 1.32e-83
nucleus Hs cellular component 89.0 2.61e-19
nucleoplasm Hs cellular component 89.0 2.61e-19
nucleolus Hs cellular component 89.0 2.61e-19
cytoplasm Hs cellular component 259 1.32e-83
cytosol Hs cellular component 259 1.32e-83
plasma membrane Hs cellular component 259 1.32e-83
cilium Hs cellular component 118 4.68e-30
heparin binding Hs molecular function 259 1.32e-83
cell surface Hs cellular component 259 1.32e-83
microtubule cytoskeleton Hs cellular component 259 1.32e-83
membrane Hs cellular component 259 1.32e-83
preribosome, large subunit precursor Hs cellular component 259 1.32e-83
cell projection Hs cellular component 118 4.68e-30
intercellular bridge Hs cellular component 259 1.32e-83
unfolded protein binding Hs molecular function 259 1.32e-83

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding SUPERFAMILY molecular function 1.21E-62