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GENE CARD

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  1. Gene 'Phmamm.CG.MTP2014.S1...'

Gene Card

Best human hits

AP1G2; AP3D1; AP4E1

Species

P.mammillata

Unique Gene ID

Phmamm.g00005122

Gene Model ID

Phmamm.CG.MTP2014.S194.g05122

Location

S194:67209..74594

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S194.g05122.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

6 results

AHC0AAA71YC13

Plate: Plate_71_C13

AHC0AAA80YA19

Plate: Plate_80_A19

AHC0AAA147YO13

Plate: Plate_147_O13

AHC0AAA83YM15

Plate: Plate_83_M15

AHC0AAA88YI15

Plate: Plate_88_I15

AHC0AAA147YA11

Plate: Plate_147_A11

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
Clathrin/coatomer_adapt-like_N Pfam Clathrin/coatomer adaptor, adaptin-like, N-terminal
ARM-like Gene3D Armadillo-like helical
ARM-type_fold SUPERFAMILY Armadillo-type fold

GOSlim

29 results

GO Term Annotation Origin Type
Golgi membrane Orthology cellular component
binding Orthology molecular function
protein binding Orthology molecular function
cytoplasm Blast cellular component
lysosomal membrane Blast cellular component
endosome Orthology cellular component
Golgi apparatus Orthology cellular component
plasma membrane Blast cellular component
protein targeting Orthology biological process
intracellular protein transport Orthology biological process
protein localization Orthology biological process
protein transport Orthology biological process
membrane Orthology cellular component
axon Blast cellular component
cytoplasmic vesicle Blast cellular component
postsynapse Blast cellular component
cytoplasmic part Orthology cellular component
membrane part Orthology cellular component
macromolecular complex Orthology cellular component
intracellular organelle part Orthology cellular component
intracellular organelle lumen Orthology cellular component
whole membrane Blast cellular component
bounding membrane of organelle Blast cellular component
Golgi apparatus part Blast cellular component
endomembrane system Blast cellular component
organelle membrane Blast cellular component
cell projection part Blast cellular component
synapse part Blast cellular component
neuron part Blast cellular component

GO (Orthology)

13 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
binding Hs molecular function
protein binding Hs molecular function
Golgi apparatus Hs cellular component
protein targeting Hs biological process
intracellular protein transport Hs biological process
protein localization Hs biological process
protein transport Hs biological process
membrane Hs cellular component
vesicle-mediated transport Hs biological process
membrane coat Hs cellular component
AP-4 adaptor complex Hs cellular component
endosome lumen Hs cellular component
trans-Golgi network membrane Hs cellular component

GO (Blast)

27 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
Golgi membrane Hs cellular component 47.8 2.05e-05
transporter activity Hs molecular function 44.7 1.84e-04
binding Hs molecular function 90.5 1.12e-18
protein binding Hs molecular function 90.5 1.12e-18
cytoplasm Hs cellular component 44.7 1.84e-04
lysosomal membrane Hs cellular component 44.7 1.84e-04
endosome Hs cellular component 47.8 2.05e-05
Golgi apparatus Hs cellular component 90.5 1.12e-18
Golgi-associated vesicle Hs cellular component 47.8 2.05e-05
plasma membrane Hs cellular component 44.7 1.84e-04
endosome membrane Hs cellular component 47.8 2.05e-05
membrane Hs cellular component 90.5 1.12e-18
membrane coat Hs cellular component 90.5 1.12e-18
AP-1 adaptor complex Hs cellular component 47.8 2.05e-05
AP-3 adaptor complex Hs cellular component 44.7 1.84e-04
AP-4 adaptor complex Hs cellular component 90.5 1.12e-18
clathrin adaptor complex Hs cellular component 47.8 2.05e-05
transport vesicle Hs cellular component 47.8 2.05e-05
axon Hs cellular component 44.7 1.84e-04
cytoplasmic vesicle membrane Hs cellular component 47.8 2.05e-05
cytoplasmic vesicle Hs cellular component 47.8 2.05e-05
endosome lumen Hs cellular component 90.5 1.12e-18
trans-Golgi network membrane Hs cellular component 90.5 1.12e-18
terminal bouton Hs cellular component 44.7 1.84e-04
postsynapse Hs cellular component 44.7 1.84e-04
presynaptic endosome Hs cellular component 44.7 1.84e-04
axon cytoplasm Hs cellular component 44.7 1.84e-04

GO (InterProScan)

4 results

GO Term Analysis Type e-value
binding SUPERFAMILY molecular function 7.68E-22
intracellular protein transport Pfam biological process 1.2E-14
vesicle-mediated transport Pfam biological process 1.2E-14
membrane coat Pfam cellular component 1.2E-14