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Gene Card

Best human hits

USP2; USP20; USP33

Species

P.mammillata

Unique Gene ID

Phmamm.g00005284

Gene Model ID

Phmamm.CG.MTP2014.S203.g05284

Location

S203:9848..13135

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S203.g05284.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

10 results

AHC0AAA48YC16

Plate: Plate_48_C16

AHC0AAA106YN07

Plate: Plate_106_N07

AHC0AAA108YB03

Plate: Plate_108_B03

AHC0AAA98YG03

Plate: Plate_98_G03

AHC0AAA106YN05

Plate: Plate_106_N05

AHC0AAA162YH18

Plate: Plate_162_H18

AHC0AAA170YC11

Plate: Plate_170_C11

AHC0AAA184YM06

Plate: Plate_184_M06

AHC0AAA265YB22

Plate: Plate_265_B22

AHC0AAA98YG01

Plate: Plate_98_G01

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
USP_CS ProSitePatterns Ubiquitin specific protease, conserved site
Znf_RING/FYVE/PHD Gene3D Zinc finger, RING/FYVE/PHD-type
USP_dom ProSiteProfiles Ubiquitin specific protease domain
Peptidase_C19_UCH Pfam Peptidase C19, ubiquitin carboxyl-terminal hydrolase
Znf_UBP Pfam Zinc finger, UBP-type

GOSlim

28 results

GO Term Annotation Origin Type
protein binding Blast molecular function
nucleus Blast cellular component
nucleoplasm Blast cellular component
cytoplasm Blast cellular component
Golgi apparatus Blast cellular component
centrosome Blast cellular component
microtubule organizing center Blast cellular component
cytosol Blast cellular component
cytoskeleton Blast cellular component
focal adhesion Blast cellular component
proteolysis InterProScan biological process
peptidase activity Blast molecular function
zinc ion binding Blast molecular function
membrane Blast cellular component
hydrolase activity Blast molecular function
ubiquitin protein ligase binding Blast molecular function
identical protein binding Blast molecular function
cell body Blast cellular component
metal ion binding Blast molecular function
perinuclear region of cytoplasm Blast cellular component
receptor binding Blast molecular function
endopeptidase activity Blast molecular function
peptidase activity, acting on L-amino acid peptides Blast molecular function
vacuole Blast cellular component
cell periphery Blast cellular component
cytoplasmic part Blast cellular component
enzyme binding Blast molecular function
macromolecular complex Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

29 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
G-protein coupled receptor binding Hs molecular function 136 2.10e-36
cysteine-type endopeptidase activity Hs molecular function 136 2.10e-36
thiol-dependent ubiquitin-specific protease activity Hs molecular function 136 2.10e-36
protein binding Hs molecular function 136 2.10e-36
nucleus Hs cellular component 70.9 5.26e-14
nucleoplasm Hs cellular component 130 2.27e-34
cytoplasm Hs cellular component 136 2.10e-36
autophagosome Hs cellular component 130 2.27e-34
Golgi apparatus Hs cellular component 130 2.27e-34
centrosome Hs cellular component 136 2.10e-36
microtubule organizing center Hs cellular component 136 2.10e-36
cytosol Hs cellular component 136 2.10e-36
cytoskeleton Hs cellular component 136 2.10e-36
focal adhesion Hs cellular component 130 2.27e-34
cell cortex Hs cellular component 70.9 5.26e-14
peptidase activity Hs molecular function 136 2.10e-36
cysteine-type peptidase activity Hs molecular function 136 2.10e-36
zinc ion binding Hs molecular function 136 2.10e-36
membrane Hs cellular component 70.9 5.26e-14
hydrolase activity Hs molecular function 136 2.10e-36
Ral GTPase binding Hs molecular function 130 2.27e-34
cyclin binding Hs molecular function 70.9 5.26e-14
VCB complex Hs cellular component 130 2.27e-34
ubiquitin protein ligase binding Hs molecular function 70.9 5.26e-14
thiol-dependent ubiquitinyl hydrolase activity Hs molecular function 136 2.10e-36
identical protein binding Hs molecular function 70.9 5.26e-14
cell body Hs cellular component 130 2.27e-34
metal ion binding Hs molecular function 136 2.10e-36
perinuclear region of cytoplasm Hs cellular component 136 2.10e-36

GO (InterProScan)

4 results

GO Term Analysis Type e-value
ubiquitin-dependent protein catabolic process ProSitePatterns biological process
zinc ion binding Pfam molecular function 4.3E-6
protein deubiquitination Pfam biological process 5.6E-10
thiol-dependent ubiquitinyl hydrolase activity Pfam molecular function 5.6E-10

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