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GENE CARD

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Gene Card

Best human hits

LRP4; LRP5; LRP6

Species

P.mammillata

Unique Gene ID

Phmamm.g00005511

Gene Model ID

Phmamm.CG.MTP2014.S214.g05511

Location

S214:118603..133695

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S214.g05511.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

43 results

AHC0AAA39YC10

Plate: Plate_39_C10

AHC0AAA39YN19

Plate: Plate_39_N19

AHC0AAA49YH14

Plate: Plate_49_H14

AHC0AAA51YF22

Plate: Plate_51_F22

AHC0AAA54YG13

Plate: Plate_54_G13

AHC0AAA58YK20

Plate: Plate_58_K20

AHC0AAA59YF20

Plate: Plate_59_F20

AHC0AAA63YB04

Plate: Plate_63_B04

AHC0AAA71YO16

Plate: Plate_71_O16

AHC0AAA79YF13

Plate: Plate_79_F13

AHC0AAA102YP03

Plate: Plate_102_P03

AHC0AAA107YF14

Plate: Plate_107_F14

AHC0AAA112YG14

Plate: Plate_112_G14

AHC0AAA118YI09

Plate: Plate_118_I09

AHC0AAA120YH02

Plate: Plate_120_H02

AHC0AAA132YA07

Plate: Plate_132_A07

AHC0AAA133YO07

Plate: Plate_133_O07

AHC0AAA135YD03

Plate: Plate_135_D03

AHC0AAA136YC03

Plate: Plate_136_C03

AHC0AAA151YD20

Plate: Plate_151_D20

AHC0AAA81YH10

Plate: Plate_81_H10

AHC0AAA87YM19

Plate: Plate_87_M19

AHC0AAA120YJ04

Plate: Plate_120_J04

AHC0AAA133YO05

Plate: Plate_133_O05

AHC0AAA172YP14

Plate: Plate_172_P14

AHC0AAA174YC10

Plate: Plate_174_C10

AHC0AAA176YK08

Plate: Plate_176_K08

AHC0AAA183YE11

Plate: Plate_183_E11

AHC0AAA185YP07

Plate: Plate_185_P07

AHC0AAA206YO14

Plate: Plate_206_O14

AHC0AAA225YI11

Plate: Plate_225_I11

AHC0AAA229YF17

Plate: Plate_229_F17

AHC0AAA229YO10

Plate: Plate_229_O10

AHC0AAA232YH20

Plate: Plate_232_H20

AHC0AAA235YF21

Plate: Plate_235_F21

AHC0AAA235YL22

Plate: Plate_235_L22

AHC0AAA235YP16

Plate: Plate_235_P16

AHC0AAA241YE05

Plate: Plate_241_E05

AHC0AAA246YO16

Plate: Plate_246_O16

AHC0AAA253YC23

Plate: Plate_253_C23

AHC0AAA39YE12

Plate: Plate_39_E12

AHC0AAA39YN17

Plate: Plate_39_N17

AHC0AAA54YI15

Plate: Plate_54_I15

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

15 results

IPR Term Analysis Definition
HYR_dom ProSiteProfiles HYR domain
LDLR_classB_rpt ProSiteProfiles LDLR class B repeat
Kringle_sf Gene3D Kringle superfamily
HYR_dom Pfam HYR domain
6-blade_b-propeller_TolB-like Gene3D Six-bladed beta-propeller, TolB-like
EGF-like_dom SMART EGF-like domain
Kringle_CS ProSitePatterns Kringle, conserved site
Kringle SMART Kringle
Sushi_SCR_CCP_dom ProSiteProfiles Sushi/SCR/CCP domain
Kringle Pfam Kringle
Kringle ProSiteProfiles Kringle
LDLR_classB_rpt SMART LDLR class B repeat
Kringle CDD Kringle
Kringle-like SUPERFAMILY Kringle-like fold
Growth_fac_rcpt_cys_sf SUPERFAMILY Growth factor receptor cysteine-rich domain superfamily

GOSlim

39 results

GO Term Annotation Origin Type
receptor binding Blast molecular function
calcium ion binding Blast molecular function
protein binding Blast molecular function
extracellular region Blast cellular component
mitochondrion Blast cellular component
early endosome Blast cellular component
endoplasmic reticulum Blast cellular component
Golgi apparatus Blast cellular component
plasma membrane Blast cellular component
cell surface Blast cellular component
membrane Blast cellular component
integral component of membrane Blast cellular component
cytoplasmic vesicle Blast cellular component
identical protein binding Blast molecular function
protein homodimerization activity Blast molecular function
neuronal cell body Blast cellular component
membrane raft Blast cellular component
synapse Blast cellular component
synaptic membrane Blast cellular component
membrane organization Blast biological process
organelle organization Blast biological process
macromolecular complex binding Blast molecular function
plasma membrane region Blast cellular component
organelle Blast cellular component
postsynapse Blast cellular component
neuron part Blast cellular component
macromolecular complex Blast cellular component
kinase activity Blast molecular function
enzyme regulator activity Blast molecular function
transmembrane transport Blast biological process
protein kinase binding Blast molecular function
whole membrane Blast cellular component
intracellular organelle part Blast cellular component
bounding membrane of organelle Blast cellular component
cell surface receptor signaling pathway Blast biological process
cell-cell signaling Blast biological process
transmembrane signaling receptor activity Blast molecular function
signaling receptor activity Blast molecular function
plasma membrane part Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

39 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
low-density lipoprotein receptor activity Hs molecular function 144 1.33e-34
receptor binding Hs molecular function 144 1.33e-34
frizzled binding Hs molecular function 144 1.33e-34
calcium ion binding Hs molecular function 152 2.97e-37
protein binding Hs molecular function 152 2.97e-37
extracellular region Hs cellular component 144 1.33e-34
mitochondrion Hs cellular component 145 3.34e-35
early endosome Hs cellular component 144 1.33e-34
endoplasmic reticulum Hs cellular component 145 3.34e-35
Golgi apparatus Hs cellular component 144 1.33e-34
plasma membrane Hs cellular component 152 2.97e-37
caveola Hs cellular component 144 1.33e-34
cell surface Hs cellular component 152 2.97e-37
postsynaptic density Hs cellular component 152 2.97e-37
membrane Hs cellular component 152 2.97e-37
integral component of membrane Hs cellular component 152 2.97e-37
flotillin complex Hs cellular component 152 2.97e-37
Wnt-protein binding Hs molecular function 152 2.97e-37
kinase inhibitor activity Hs molecular function 144 1.33e-34
toxin transporter activity Hs molecular function 144 1.33e-34
dendrite Hs cellular component 152 2.97e-37
receptor tyrosine kinase binding Hs molecular function 152 2.97e-37
cytoplasmic vesicle Hs cellular component 144 1.33e-34
neuromuscular junction Hs cellular component 152 2.97e-37
early endosome membrane Hs cellular component 144 1.33e-34
apolipoprotein binding Hs molecular function 152 2.97e-37
identical protein binding Hs molecular function 144 1.33e-34
protein homodimerization activity Hs molecular function 152 2.97e-37
Wnt-activated receptor activity Hs molecular function 152 2.97e-37
neuronal cell body Hs cellular component 152 2.97e-37
receptor complex Hs cellular component 152 2.97e-37
membrane raft Hs cellular component 144 1.33e-34
synapse Hs cellular component 144 1.33e-34
coreceptor activity involved in Wnt signaling pathway Hs molecular function 145 3.34e-35
synaptic membrane Hs cellular component 152 2.97e-37
scaffold protein binding Hs molecular function 152 2.97e-37
coreceptor activity involved in canonical Wnt signaling pathway Hs molecular function 145 3.34e-35
Wnt-Frizzled-LRP5/6 complex Hs cellular component 145 3.34e-35
Wnt signalosome Hs cellular component 145 3.34e-35

GO (InterProScan)

No result

GO Term Analysis Type e-value