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  2. Gene 'Boleac.CG.SB_v3.S150...' > 
  3. Gene 'Phmamm.CG.MTP2014.S2...'

Gene Card

Best human hits

NFYA

Species

P.mammillata

Unique Gene ID

Phmamm.g00005794

Gene Model ID

Phmamm.CG.MTP2014.S231.g05794

Location

S231:161769..166078

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S231.g05794.01.t
Phmamm.CG.MTP2014.S231.g05794.02.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

8 results

AHC0AAA45YE19

Plate: Plate_45_E19

AHC0AAA65YJ10

Plate: Plate_65_J10

AHC0AAA112YC15

Plate: Plate_112_C15

AHC0AAA126YK23

Plate: Plate_126_K23

AHC0AAA151YI24

Plate: Plate_151_I24

AHC0AAA151YP16

Plate: Plate_151_P16

AHC0AAA155YA20

Plate: Plate_155_A20

AHC0AAA191YM04

Plate: Plate_191_M04

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
NFYA PANTHER Nuclear transcription factor Y subunit A
NFYA Pfam Nuclear transcription factor Y subunit A
NFYA PRINTS Nuclear transcription factor Y subunit A
NFYA ProSiteProfiles Nuclear transcription factor Y subunit A
CCAAT-binding_factor_CS ProSitePatterns CCAAT-binding factor, conserved site
NFYA SMART Nuclear transcription factor Y subunit A

GOSlim

16 results

GO Term Annotation Origin Type
RNA polymerase II transcription factor activity, sequence-specific DNA binding Orthology molecular function
DNA binding Orthology molecular function
transcription factor activity, sequence-specific DNA binding Orthology molecular function
protein binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
transcription, DNA-templated Orthology biological process
regulation of transcription, DNA-templated Orthology biological process
regulation of transcription from RNA polymerase II promoter Orthology biological process
transcription from RNA polymerase II promoter Orthology biological process
transcription regulatory region DNA binding Orthology molecular function
positive regulation of transcription, DNA-templated Orthology biological process
RNA polymerase II regulatory region sequence-specific DNA binding Orthology molecular function
transcription regulatory region sequence-specific DNA binding Orthology molecular function
nuclear part Orthology cellular component
macromolecular complex Orthology cellular component

GO (Orthology)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
RNA polymerase II distal enhancer sequence-specific DNA binding Hs molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function
core promoter sequence-specific DNA binding Hs molecular function
DNA binding Hs molecular function
transcription factor activity, sequence-specific DNA binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
regulation of transcription from RNA polymerase II promoter Hs biological process
transcription from RNA polymerase II promoter Hs biological process
CCAAT-binding factor complex Hs cellular component
protein-DNA complex Hs cellular component
transcription regulatory region DNA binding Hs molecular function
positive regulation of transcription, DNA-templated Hs biological process
rhythmic process Hs biological process
RNA polymerase II transcription factor complex Hs cellular component

GO (Blast)

12 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
RNA polymerase II distal enhancer sequence-specific DNA binding Hs molecular function 145 3.14e-40
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 145 3.14e-40
core promoter sequence-specific DNA binding Hs molecular function 145 3.14e-40
DNA binding Hs molecular function 145 3.14e-40
transcription factor activity, sequence-specific DNA binding Hs molecular function 145 3.14e-40
protein binding Hs molecular function 145 3.14e-40
nucleus Hs cellular component 145 3.14e-40
nucleoplasm Hs cellular component 145 3.14e-40
CCAAT-binding factor complex Hs cellular component 145 3.14e-40
protein-DNA complex Hs cellular component 145 3.14e-40
transcription regulatory region DNA binding Hs molecular function 145 3.14e-40
RNA polymerase II transcription factor complex Hs cellular component 145 3.14e-40

GO (InterProScan)

4 results

GO Term Analysis Type e-value
DNA binding ProSitePatterns molecular function
transcription factor activity, sequence-specific DNA binding PANTHER molecular function 2.0E-54
regulation of transcription, DNA-templated PANTHER biological process 2.0E-54
CCAAT-binding factor complex ProSitePatterns cellular component

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