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GENE CARD

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Gene Card

Best human hits

EARS2; EPRS; QARS

Species

P.mammillata

Unique Gene ID

Phmamm.g00005894

Gene Model ID

Phmamm.CG.MTP2014.S236.g05894

Location

S236:163573..167314

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S236.g05894.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

18 results

AHC0AAA2YC15

Plate: Plate_2_C15

AHC0AAA25YI05

Plate: Plate_25_I05

AHC0AAA42YD19

Plate: Plate_42_D19

AHC0AAA58YB14

Plate: Plate_58_B14

AHC0AAA59YA03

Plate: Plate_59_A03

AHC0AAA103YM14

Plate: Plate_103_M14

AHC0AAA120YG11

Plate: Plate_120_G11

AHC0AAA121YI23

Plate: Plate_121_I23

AHC0AAA90YE08

Plate: Plate_90_E08

AHC0AAA160YK18

Plate: Plate_160_K18

AHC0AAA166YN13

Plate: Plate_166_N13

AHC0AAA176YE23

Plate: Plate_176_E23

AHC0AAA180YI19

Plate: Plate_180_I19

AHC0AAA203YI13

Plate: Plate_203_I13

AHC0AAA206YA11

Plate: Plate_206_A11

AHC0AAA210YB24

Plate: Plate_210_B24

AHC0AAA261YE08

Plate: Plate_261_E08

AHC0AAA262YF01

Plate: Plate_262_F01

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

10 results

IPR Term Analysis Definition
Rossmann-like_a/b/a_fold Gene3D Rossmann-like alpha/beta/alpha sandwich fold
Gln-tRNA-synth_Ib_RNA-bd_N Pfam Glutaminyl-tRNA synthetase, class Ib, non-specific RNA-binding domain, N-terminal
Ribosomal_L25/Gln-tRNA_synth SUPERFAMILY Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily
Gln-tRNA-synth TIGRFAM Glutamine-tRNA synthetase
Rbsml_L25/Gln-tRNA_synth_N Gene3D Ribosomal protein L25/Gln-tRNA synthetase, N-terminal
Gln-tRNA-synth_Ib_RNA-bd_2 Pfam Glutaminyl-tRNA synthetase, class Ib, non-specific RNA-binding domain 2
Glu/Gln-tRNA-synth PRINTS Glutamyl/glutaminyl-tRNA synthetase
Glu/Gln-tRNA-synth_Ib_codon-bd Pfam Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain
Glu/Gln-tRNA-synth_Ib_cat-dom Pfam Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain
aa-tRNA-synth_I_CS ProSitePatterns Aminoacyl-tRNA synthetase, class I, conserved site

GOSlim

31 results

GO Term Annotation Origin Type
nucleotide binding Orthology molecular function
RNA binding Blast molecular function
catalytic activity Blast molecular function
protein binding Orthology molecular function
ATP binding Orthology molecular function
cytoplasm Orthology cellular component
mitochondrion Blast cellular component
mitochondrial matrix Orthology cellular component
cytosol Orthology cellular component
brain development Orthology biological process
zinc ion binding Blast molecular function
membrane Orthology cellular component
integral component of membrane Orthology cellular component
ligase activity Orthology molecular function
protein kinase binding Orthology molecular function
macromolecular complex Orthology cellular component
identical protein binding Blast molecular function
protein homodimerization activity Blast molecular function
negative regulation of transcription, DNA-templated Orthology biological process
metal ion binding Blast molecular function
enzyme regulator activity Orthology molecular function
protein kinase activity Orthology molecular function
RNA metabolic process Orthology biological process
regulation of catalytic activity Orthology biological process
intracellular part Orthology cellular component
intracellular signal transduction Orthology biological process
cellular response to stress Orthology biological process
negative regulation of signal transduction Orthology biological process
protein phosphorylation Orthology biological process
negative regulation of apoptotic process Orthology biological process
enzyme binding Blast molecular function

GO (Orthology)

24 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
nucleotide binding Hs molecular function
aminoacyl-tRNA ligase activity Hs molecular function
glutamine-tRNA ligase activity Hs molecular function
protein kinase inhibitor activity Hs molecular function
protein binding Hs molecular function
ATP binding Hs molecular function
cytoplasm Hs cellular component
mitochondrial matrix Hs cellular component
cytosol Hs cellular component
translation Hs biological process
tRNA aminoacylation for protein translation Hs biological process
glutaminyl-tRNA aminoacylation Hs biological process
negative regulation of protein kinase activity Hs biological process
brain development Hs biological process
membrane Hs cellular component
integral component of membrane Hs cellular component
ligase activity Hs molecular function
aminoacyl-tRNA synthetase multienzyme complex Hs cellular component
protein kinase binding Hs molecular function
negative regulation of stress-activated MAPK cascade Hs biological process
macromolecular complex Hs cellular component
tRNA aminoacylation Hs biological process
negative regulation of transcription, DNA-templated Hs biological process
negative regulation of apoptotic signaling pathway Hs biological process

GO (Blast)

30 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
tRNA binding Hs molecular function 52.8 3.90e-07
nucleotide binding Hs molecular function 774 0.0
RNA binding Hs molecular function 226 7.30e-63
catalytic activity Hs molecular function 226 7.30e-63
aminoacyl-tRNA ligase activity Hs molecular function 774 0.0
glutamate-tRNA ligase activity Hs molecular function 226 7.30e-63
glutamine-tRNA ligase activity Hs molecular function 774 0.0
proline-tRNA ligase activity Hs molecular function 226 7.30e-63
protein kinase inhibitor activity Hs molecular function 774 0.0
protein binding Hs molecular function 774 0.0
ATP binding Hs molecular function 774 0.0
cytoplasm Hs cellular component 774 0.0
mitochondrion Hs cellular component 52.8 3.90e-07
mitochondrial matrix Hs cellular component 774 0.0
cytosol Hs cellular component 774 0.0
zinc ion binding Hs molecular function 226 7.30e-63
membrane Hs cellular component 774 0.0
integral component of membrane Hs cellular component 774 0.0
ligase activity Hs molecular function 774 0.0
aminoacyl-tRNA synthetase multienzyme complex Hs cellular component 774 0.0
protein kinase binding Hs molecular function 774 0.0
intracellular ribonucleoprotein complex Hs cellular component 226 7.30e-63
macromolecular complex Hs cellular component 774 0.0
RNA stem-loop binding Hs molecular function 226 7.30e-63
identical protein binding Hs molecular function 226 7.30e-63
protein homodimerization activity Hs molecular function 226 7.30e-63
metal ion binding Hs molecular function 226 7.30e-63
glutamate-tRNA(Gln) ligase activity Hs molecular function 52.8 3.90e-07
GTPase binding Hs molecular function 226 7.30e-63
GAIT complex Hs cellular component 226 7.30e-63

GO (InterProScan)

9 results

GO Term Analysis Type e-value
nucleotide binding TIGRFAM molecular function 7.4E-129
aminoacyl-tRNA ligase activity Pfam molecular function 1.3E-108
glutamine-tRNA ligase activity TIGRFAM molecular function 7.4E-129
ATP binding TIGRFAM molecular function 7.4E-129
cytoplasm TIGRFAM cellular component 7.4E-129
translation SUPERFAMILY biological process 7.32E-15
tRNA aminoacylation for protein translation Pfam biological process 7.0E-48
glutaminyl-tRNA aminoacylation TIGRFAM biological process 7.4E-129
tRNA aminoacylation Pfam biological process 1.3E-108