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GENE CARD

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Gene Card

Best human hits

CALCOCO1; CALCOCO2; TAX1BP1

Species

P.mammillata

Unique Gene ID

Phmamm.g00006006

Gene Model ID

Phmamm.CG.MTP2014.S242.g06006

Location

S242:168617..183545

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

20 results

AHC0AAA70YG17

Plate: Plate_70_G17

AHC0AAA74YH07

Plate: Plate_74_H07

AHC0AAA105YG09

Plate: Plate_105_G09

AHC0AAA113YA05

Plate: Plate_113_A05

AHC0AAA113YO16

Plate: Plate_113_O16

AHC0AAA114YM22

Plate: Plate_114_M22

AHC0AAA146YP01

Plate: Plate_146_P01

AHC0AAA148YI19

Plate: Plate_148_I19

AHC0AAA91YB06

Plate: Plate_91_B06

AHC0AAA92YD01

Plate: Plate_92_D01

AHC0AAA99YJ22

Plate: Plate_99_J22

AHC0AAA164YO19

Plate: Plate_164_O19

AHC0AAA194YP15

Plate: Plate_194_P15

AHC0AAA224YP08

Plate: Plate_224_P08

AHC0AAA228YA23

Plate: Plate_228_A23

AHC0AAA249YE08

Plate: Plate_249_E08

AHC0AAA262YC10

Plate: Plate_262_C10

AHC0AAA265YF21

Plate: Plate_265_F21

AHC0AAA266YI07

Plate: Plate_266_I07

AHC0AAA92YF03

Plate: Plate_92_F03

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

No result

IPR Term Analysis Definition

GOSlim

38 results

GO Term Annotation Origin Type
chromatin binding Orthology molecular function
transcription cofactor activity Orthology molecular function
transcription coactivator activity Orthology molecular function
protein binding Orthology molecular function
nucleus Orthology cellular component
cytoplasm Orthology cellular component
cytosol Orthology cellular component
cytoskeleton Orthology cellular component
transcription, DNA-templated Orthology biological process
regulation of transcription, DNA-templated Orthology biological process
apoptotic process Orthology biological process
signal transduction Orthology biological process
protein C-terminus binding Orthology molecular function
positive regulation of gene expression Orthology biological process
membrane Orthology cellular component
kinase binding Orthology molecular function
cytoplasmic vesicle Orthology cellular component
protein homodimerization activity Orthology molecular function
negative regulation of apoptotic process Orthology biological process
intracellular membrane-bounded organelle Orthology cellular component
sequence-specific DNA binding Orthology molecular function
transcription regulatory region DNA binding Orthology molecular function
positive regulation of transcription, DNA-templated Orthology biological process
positive regulation of transcription from RNA polymerase II promoter Orthology biological process
metal ion binding Orthology molecular function
perinuclear region of cytoplasm Orthology cellular component
extracellular exosome Orthology cellular component
vacuolar membrane Orthology cellular component
intracellular non-membrane-bounded organelle Orthology cellular component
nuclear lumen Orthology cellular component
vacuole Orthology cellular component
cell surface receptor signaling pathway Orthology biological process
cell-cell signaling Orthology biological process
response to lipid Orthology biological process
cellular response to organic substance Orthology biological process
regulation of molecular function Orthology biological process
transcription factor activity, sequence-specific DNA binding Orthology molecular function
organelle organization Orthology biological process

GO (Orthology)

41 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
autophagosome membrane Hs cellular component
nuclear chromatin Hs cellular component
core promoter binding Hs molecular function
chromatin binding Hs molecular function
transcription cofactor activity Hs molecular function
transcription coactivator activity Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
cytoplasm Hs cellular component
autophagosome Hs cellular component
cytosol Hs cellular component
cytoskeleton Hs cellular component
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
autophagy Hs biological process
apoptotic process Hs biological process
signal transduction Hs biological process
beta-catenin binding Hs molecular function
protein C-terminus binding Hs molecular function
positive regulation of gene expression Hs biological process
membrane Hs cellular component
viral process Hs biological process
Wnt signaling pathway Hs biological process
kinase binding Hs molecular function
ligand-dependent nuclear receptor transcription coactivator activity Hs molecular function
intracellular steroid hormone receptor signaling pathway Hs biological process
cytoplasmic vesicle Hs cellular component
negative regulation of NF-kappaB transcription factor activity Hs biological process
negative regulation of type I interferon production Hs biological process
protein homodimerization activity Hs molecular function
negative regulation of apoptotic process Hs biological process
intracellular membrane-bounded organelle Hs cellular component
sequence-specific DNA binding Hs molecular function
transcription regulatory region DNA binding Hs molecular function
positive regulation of transcription, DNA-templated Hs biological process
positive regulation of transcription from RNA polymerase II promoter Hs biological process
metal ion binding Hs molecular function
perinuclear region of cytoplasm Hs cellular component
armadillo repeat domain binding Hs molecular function
extracellular exosome Hs cellular component
positive regulation of autophagosome maturation Hs biological process

GO (Blast)

26 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
autophagosome membrane Hs cellular component 67.4 1.49e-11
nuclear chromatin Hs cellular component 67.0 3.32e-11
core promoter binding Hs molecular function 67.0 3.32e-11
chromatin binding Hs molecular function 67.0 3.32e-11
transcription cofactor activity Hs molecular function 67.0 3.32e-11
transcription coactivator activity Hs molecular function 67.0 3.32e-11
protein binding Hs molecular function 101 7.92e-22
nucleus Hs cellular component 67.4 1.49e-11
cytoplasm Hs cellular component 67.4 1.49e-11
autophagosome Hs cellular component 67.4 1.49e-11
cytosol Hs cellular component 101 7.92e-22
cytoskeleton Hs cellular component 67.4 1.49e-11
beta-catenin binding Hs molecular function 67.0 3.32e-11
protein C-terminus binding Hs molecular function 67.0 3.32e-11
membrane Hs cellular component 67.4 1.49e-11
kinase binding Hs molecular function 101 7.92e-22
ligand-dependent nuclear receptor transcription coactivator activity Hs molecular function 67.0 3.32e-11
cytoplasmic vesicle Hs cellular component 67.4 1.49e-11
protein homodimerization activity Hs molecular function 67.4 1.49e-11
intracellular membrane-bounded organelle Hs cellular component 67.4 1.49e-11
sequence-specific DNA binding Hs molecular function 67.0 3.32e-11
transcription regulatory region DNA binding Hs molecular function 67.0 3.32e-11
metal ion binding Hs molecular function 101 7.92e-22
perinuclear region of cytoplasm Hs cellular component 67.4 1.49e-11
armadillo repeat domain binding Hs molecular function 67.0 3.32e-11
extracellular exosome Hs cellular component 101 7.92e-22

GO (InterProScan)

No result

GO Term Analysis Type e-value